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A. carolinensis Gene: VPS50 - ENSACAG00000012934 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000012934
NameVPS50
DescriptionVPS50 EARP/GARPII complex subunit [Source:HGNC Symbol;Acc:HGNC:25956]
OrganismAnolis carolinensis (green anole)
Synonym(s)ccdc132, dkfzp313i2429, flj20097, kiaa1861, vps54l
Orthologs(s)23 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.43e3
  • 3.43e3
  • 6.35e3
82.97
  • 82.97
  • 68.50
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
3.51e3
  • 3.51e3
82.57
  • 82.57
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
3.86e3
  • 3.86e3
80.83
  • 80.83
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
4.73e3
  • 4.73e3
76.52
  • 76.52
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
5.48e3
  • 5.48e3
  • 7.87e3
72.79
  • 72.79
  • 60.91
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
5.82e3
  • 5.82e3
71.11
  • 71.11
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
6.26e3
  • 6.26e3
68.94
  • 68.94
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
6.49e3
  • 6.49e3
67.78
  • 67.78
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
6.71e3
  • 6.71e3
66.70
  • 66.70
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
7.62e3
  • 7.62e3
62.17
  • 62.17
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
7.94e3
  • 7.94e3
60.57
  • 60.57
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
8.53e3
  • 8.53e3
57.67
  • 57.67
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
8.55e3
  • 8.55e3
  • 8.60e3
57.55
  • 57.55
  • 57.32
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
8.81e3
  • 8.81e3
56.27
  • 56.27
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
9.26e3
  • 9.26e3
  • 1.01e4
54.01
  • 54.01
  • 50.09
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSACAG00000012934.

Cross-references

EnsemblENSACAG00000012934 (VPS50)
HGNCHGNC:25956 (VPS50)
Uniprot/SPTREMBLG1KN98, G1KN98_ANOCA

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