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A. carolinensis Gene: ABCB6 - ENSACAG00000013017 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000013017
NameABCB6
DescriptionATP binding cassette subfamily B member 6 (Langereis blood group) [Source:HGNC Symbol;Acc:HGNC:47]
OrganismAnolis carolinensis (green anole)
Synonym(s)est45597, mtabc3, umat
Orthologs(s)21 orthologs
Paralog(s)29 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.43e3
  • 2.43e3
  • 5.34e3
87.95
  • 87.95
  • 73.52
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
2.85e3
  • 2.85e3
85.86
  • 85.86
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
2.97e3
  • 2.97e3
85.24
  • 85.24
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.16e3
  • 3.16e3
  • 3.40e3
84.30
  • 84.30
  • 83.15
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
4.51e3
  • 4.51e3
77.63
  • 77.63
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
5.67e3
  • 5.67e3
71.85
  • 71.85
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.97e3
  • 6.97e3
  • 8.54e3
65.39
  • 65.39
  • 57.59
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
7.62e3
  • 7.62e3
62.19
  • 62.19
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
8.35e3
  • 8.35e3
58.55
  • 58.55
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
8.38e3
  • 8.38e3
58.41
  • 58.41
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
8.97e3
  • 8.97e3
55.45
  • 55.45
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
8.99e3
  • 8.99e3
55.38
  • 55.38
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
49.19
  • 49.19
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species16 genesCompare expression
Bilateria20 species21 genesCompare expression

Orthology information comes from OMA : ENSACAG00000013017.

Paralogs (same species)

Cross-references

EnsemblENSACAG00000013017 (ABCB6)
HGNCHGNC:47 (ABCB6)
Uniprot/SPTREMBLG1KN81, G1KN81_ANOCA

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