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A. carolinensis Gene: SYDE2 - ENSACAG00000013112 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000013112
NameSYDE2
Descriptionsynapse defective 1, Rho GTPase, homolog 2 (C. elegans) [Source:HGNC Symbol;Acc:HGNC:25841]
OrganismAnolis carolinensis (green anole)
Synonym(s)flj13815
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:1000003dewlap
  • UBERON:0000104life cycle
7.45e3
  • 7.45e3
63.03
  • 63.03
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
8.05e3
  • 8.05e3
60.05
  • 60.05
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
8.15e3
  • 8.15e3
59.56
  • 59.56
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
8.57e3
  • 8.57e3
57.47
  • 57.47
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
9.27e3
  • 9.27e3
53.96
  • 53.96
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
9.33e3
  • 9.33e3
53.70
  • 53.70
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
9.38e3
  • 9.38e3
53.44
  • 53.44
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
49.05
  • 49.05
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
  • 1.29e4
47.41
  • 47.41
  • 35.90
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
47.26
  • 47.26
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
  • 1.46e4
40.62
  • 40.62
  • 27.43
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
39.05
  • 39.05
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.38e4
  • 1.38e4
  • 1.43e4
31.63
  • 31.63
  • 29.20
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression

Orthology information comes from OMA : ENSACAG00000013112.

Cross-references

EnsemblENSACAG00000013112 (SYDE2)
HGNCHGNC:25841 (SYDE2)
Uniprot/SPTREMBLH9GJL7, H9GJL7_ANOCA

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