Gene: EFCC1 - ENSACAG00000013121 - Anolis carolinensis (green anole)

General information

Ensembl ID	ENSACAG00000013121
Name	EFCC1
Description	EF-hand and coiled-coil domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25692]
Organism	Anolis carolinensis (green anole)
Synonym(s)	c3orf73, ccdc48, flj12057
Orthologs(s)	2 orthologs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000922	embryo	[+] 2 stages UBERON:0000104life cycle UBERON:0000068embryo stage	6.57e3 6.57e3 1.05e4	67.37 67.37 47.70	AEIR AEIR AEIR
UBERON:0005417	forelimb bud	[+] 1 stage UBERON:0000068embryo stage	7.61e3 7.61e3	62.21 62.21	AEIR AEIR
UBERON:0005418	hindlimb bud	[+] 1 stage UBERON:0000068embryo stage	8.20e3 8.20e3	59.30 59.30	AEIR AEIR
UBERON:0008812	hemipenis	[+] 1 stage UBERON:0000068embryo stage	8.87e3 8.87e3	55.96 55.96	AEIR AEIR
UBERON:0002048	lung	[+] 1 stage UBERON:0000104life cycle	9.98e3 9.98e3	50.47 50.47	AEIR AEIR
UBERON:0000955	brain	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	1.06e4 1.06e4 1.16e4	47.39 47.39 42.27	AEIR AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.15e4 1.15e4	42.78 42.78	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000104life cycle	1.17e4 1.17e4	42.08 42.08	AEIR AEIR
UBERON:0002369	adrenal gland	[+] 1 stage UBERON:0000104life cycle	1.24e4 1.24e4	38.59 38.59	AEIR AEIR
UBERON:1000003	dewlap	[+] 1 stage UBERON:0000104life cycle	1.25e4 1.25e4	38.08 38.08	AEIR AEIR
UBERON:0001134	skeletal muscle tissue	[+] 1 stage UBERON:0000104life cycle	1.27e4 1.27e4	37.10 37.10	AEIR AEIR
UBERON:0000948	heart	[+] 1 stage UBERON:0000104life cycle	1.44e4 1.44e4	28.48 28.48	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Amniota	2 species Macaca mulatta (macaque) Equus caballus (horse)	2 genes ENSMMUG00000006344 ENSECAG00000022395	Compare expression	[+]

Orthology information comes from OMA : ENSACAG00000013121.

Cross-references

Ensembl	ENSACAG00000013121 (EFCC1)
HGNC	HGNC:25692 (EFCC1)
Uniprot/SPTREMBL	G1KN93, G1KN93_ANOCA