Gene: CAPN6 - ENSACAG00000013131 - Anolis carolinensis (green anole)

General information

Ensembl ID	ENSACAG00000013131
Name	CAPN6
Description	calpain 6 [Source:HGNC Symbol;Acc:HGNC:1483]
Organism	Anolis carolinensis (green anole)
Synonym(s)	calpm, canpx, capnx
Orthologs(s)	3 orthologs
Paralog(s)	3 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000948	heart	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	4.84e3 4.84e3 5.25e3	75.96 75.96 73.93	AEIR AEIR AEIR
UBERON:0002369	adrenal gland	[+] 1 stage UBERON:0000104life cycle	6.70e3 6.70e3	66.72 66.72	AEIR AEIR
UBERON:0001134	skeletal muscle tissue	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	7.46e3 7.46e3 1.06e4	62.97 62.97 47.62	AEIR AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000104life cycle	8.09e3 8.09e3	59.82 59.82	AEIR AEIR
UBERON:0002048	lung	[+] 1 stage UBERON:0000104life cycle	8.42e3 8.42e3	58.22 58.22	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	8.88e3 8.88e3	55.93 55.93	AEIR AEIR
UBERON:0005417	forelimb bud	[+] 1 stage UBERON:0000068embryo stage	1.01e4 1.01e4	49.67 49.67	AEIR AEIR
UBERON:0008812	hemipenis	[+] 1 stage UBERON:0000068embryo stage	1.18e4 1.18e4	41.46 41.46	AEIR AEIR
UBERON:0005418	hindlimb bud	[+] 1 stage UBERON:0000068embryo stage	1.26e4 1.26e4	37.51 37.51	AEIR AEIR
UBERON:1000003	dewlap	[+] 1 stage UBERON:0000104life cycle	1.34e4 1.34e4	33.38 33.38	AEIR AEIR
UBERON:0000955	brain	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	1.37e4 1.37e4 1.64e4	31.88 31.88 18.42	AEIR AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000104life cycle	1.38e4 1.38e4	31.55 31.55	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Sauria	1 species Gallus gallus (chicken)	1 gene ENSGALG00000008006 CAPN6	Compare expression	[+]
Amniota	2 species Ornithorhynchus anatinus (platypus) Gallus gallus (chicken)	2 genes ENSOANG00000002404 CAPN6 ENSGALG00000008006 CAPN6	Compare expression	[+]
Tetrapoda	3 species Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog)	3 genes ENSOANG00000002404 CAPN6 ENSGALG00000008006 CAPN6 ENSXETG00000012420 capn6	Compare expression	[+]

Orthology information comes from OMA : ENSACAG00000013131.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Chordata	3 genes ENSACAG00000000755 ENSACAG00000001768 CAPN9 ENSACAG00000015493 CAPN3	Compare expression	[+]

Paralogy information comes from OMA : ENSACAG00000013131.

Cross-references

Ensembl	ENSACAG00000013131 (CAPN6)
HGNC	HGNC:1483 (CAPN6)
Uniprot/SPTREMBL	H9GJR3, H9GJR3_ANOCA