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A. carolinensis Gene: VPS35 - ENSACAG00000013293 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000013293
NameVPS35
DescriptionVPS35 retromer complex component [Source:HGNC Symbol;Acc:HGNC:13487]
OrganismAnolis carolinensis (green anole)
Synonym(s)flj10752, mem3, park17
Orthologs(s)24 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.54e3
  • 1.54e3
92.37
  • 92.37
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.77e3
  • 1.77e3
  • 3.67e3
91.21
  • 91.21
  • 81.80
AEIR
  • AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.95e3
  • 1.95e3
90.33
  • 90.33
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
2.16e3
  • 2.16e3
  • 3.01e3
89.29
  • 89.29
  • 85.05
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.22e3
  • 2.22e3
  • 2.64e3
88.97
  • 88.97
  • 86.89
AEIR
  • AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
2.25e3
  • 2.25e3
88.85
  • 88.85
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.32e3
  • 2.32e3
88.51
  • 88.51
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
2.39e3
  • 2.39e3
88.14
  • 88.14
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
2.59e3
  • 2.59e3
87.14
  • 87.14
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
2.68e3
  • 2.68e3
86.70
  • 86.70
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
2.74e3
  • 2.74e3
86.39
  • 86.39
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.88e3
  • 2.88e3
  • 4.48e3
85.72
  • 85.72
  • 77.77
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
3.49e3
  • 3.49e3
82.67
  • 82.67
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
4.22e3
  • 4.22e3
79.07
  • 79.07
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
4.60e3
  • 4.60e3
77.18
  • 77.18
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSACAG00000013293.

Cross-references

EnsemblENSACAG00000013293 (VPS35)
HGNCHGNC:13487 (VPS35)
Uniprot/SPTREMBLH9GJW8, H9GJW8_ANOCA

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