A. carolinensis Gene: COL1A2 - ENSACAG00000013301 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000013301
NameCOL1A2
Descriptioncollagen, type I, alpha 2 [Source:HGNC Symbol;Acc:HGNC:2198]
OrganismAnolis carolinensis (green anole)
Synonym(s)oi4

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
614
  • 614
96.96
  • 96.96
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.18e3
  • 1.18e3
94.15
  • 94.15
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.29e3
  • 1.29e3
  • 6.80e3
93.60
  • 93.60
  • 66.23
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.78e3
  • 1.78e3
91.18
  • 91.18
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.44e3
  • 2.44e3
  • 5.20e3
87.88
  • 87.88
  • 74.17
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
4.19e3
  • 4.19e3
79.19
  • 79.19
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
4.22e3
  • 4.22e3
79.03
  • 79.03
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
5.26e3
  • 5.26e3
73.89
  • 73.89
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
5.38e3
  • 5.38e3
73.31
  • 73.31
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
5.40e3
  • 5.40e3
73.19
  • 73.19
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.35e3
  • 6.35e3
  • 1.36e4
68.50
  • 68.50
  • 32.54
AEIR
  • AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
8.21e3
  • 8.21e3
59.26
  • 59.26
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
9.34e3
  • 9.34e3
53.65
  • 53.65
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
47.48
  • 47.48
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSACAG00000013301 (COL1A2)
HGNCHGNC:2198 (COL1A2)
Uniprot/SPTREMBLG1KNZ5, G1KNZ5_ANOCA

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