A. carolinensis Gene: PDCD6IP - ENSACAG00000013370 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000013370
NamePDCD6IP
Descriptionprogrammed cell death 6 interacting protein [Source:HGNC Symbol;Acc:HGNC:8766]
OrganismAnolis carolinensis (green anole)
Synonym(s)aip1, alix, hp95
Orthologs(s)26 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0000104life cycle
1.45e3
  • 1.45e3
92.82
  • 92.82
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.70e3
  • 1.70e3
91.56
  • 91.56
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
2.21e3
  • 2.21e3
89.03
  • 89.03
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.24e3
  • 2.24e3
  • 2.72e3
88.86
  • 88.86
  • 86.51
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
2.71e3
  • 2.71e3
86.57
  • 86.57
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.71e3
  • 2.71e3
86.54
  • 86.54
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
2.76e3
  • 2.76e3
86.31
  • 86.31
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
2.86e3
  • 2.86e3
85.79
  • 85.79
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.92e3
  • 2.92e3
  • 3.07e3
85.53
  • 85.53
  • 84.77
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
3.03e3
  • 3.03e3
84.98
  • 84.98
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
3.05e3
  • 3.05e3
84.84
  • 84.84
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
3.26e3
  • 3.26e3
83.81
  • 83.81
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.37e3
  • 3.37e3
  • 4.23e3
83.27
  • 83.27
  • 78.99
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
3.82e3
  • 3.82e3
81.05
  • 81.05
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression
Bilateria26 species26 genesCompare expression

Orthology information comes from OMA : ENSACAG00000013370.

Cross-references

EnsemblENSACAG00000013370 (PDCD6IP)
HGNCHGNC:8766 (PDCD6IP)
Uniprot/SPTREMBLH9GJY1, H9GJY1_ANOCA

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