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A. carolinensis Gene: SLC6A6 - ENSACAG00000013426 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000013426
NameSLC6A6
Descriptionsolute carrier family 6 (neurotransmitter transporter), member 6 [Source:HGNC Symbol;Acc:HGNC:11052]
OrganismAnolis carolinensis (green anole)
Synonym(s)taut
Orthologs(s)20 orthologs
Paralog(s)16 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.22e3
  • 1.22e3
  • 3.43e3
93.96
  • 93.96
  • 82.95
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.44e3
  • 1.44e3
92.84
  • 92.84
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.63e3
  • 1.63e3
91.90
  • 91.90
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.51e3
  • 2.51e3
  • 6.05e3
87.56
  • 87.56
  • 69.98
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
3.23e3
  • 3.23e3
83.96
  • 83.96
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.25e3
  • 3.25e3
  • 4.97e3
83.87
  • 83.87
  • 75.34
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
3.33e3
  • 3.33e3
83.46
  • 83.46
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
3.44e3
  • 3.44e3
  • 5.12e3
82.91
  • 82.91
  • 74.57
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
4.36e3
  • 4.36e3
78.37
  • 78.37
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
5.59e3
  • 5.59e3
72.26
  • 72.26
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
5.65e3
  • 5.65e3
71.95
  • 71.95
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
5.99e3
  • 5.99e3
70.28
  • 70.28
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
5.99e3
  • 5.99e3
70.25
  • 70.25
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
46.48
  • 46.48
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
36.39
  • 36.39
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota17 species18 genesCompare expression
Euteleostomi18 species20 genesCompare expression

Orthology information comes from OMA : ENSACAG00000013426.

Paralogs (same species)

Cross-references

EnsemblENSACAG00000013426 (SLC6A6)
HGNCHGNC:11052 (SLC6A6)
Uniprot/SPTREMBLG1KNV1, G1KNV1_ANOCA

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