Gene: VDR - ENSACAG00000013485 - Anolis carolinensis (green anole)

General information

Ensembl ID	ENSACAG00000013485
Name	VDR
Description	vitamin D (1,25- dihydroxyvitamin D3) receptor [Source:HGNC Symbol;Acc:HGNC:12679]
Organism	Anolis carolinensis (green anole)
Synonym(s)	nr1i1, ppp1r163

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0002113	kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	2.88e3 2.88e3	85.69 85.69	AEIR AEIR
UBERON:0001134	skeletal muscle tissue	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	3.43e3 3.43e3 3.56e3	82.96 82.96 82.34	AEIR AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000104life cycle	5.82e3 5.82e3	71.10 71.10	AEIR AEIR
UBERON:1000003	dewlap	[+] 1 stage UBERON:0000104life cycle	5.88e3 5.88e3	70.83 70.83	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000104life cycle	6.47e3 6.47e3	67.88 67.88	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	7.96e3 7.96e3 8.16e3	60.47 60.47 59.48	AEIR AEIR AEIR
UBERON:0002369	adrenal gland	[+] 1 stage UBERON:0000104life cycle	7.98e3 7.98e3	60.40 60.40	AEIR AEIR
UBERON:0005417	forelimb bud	[+] 1 stage UBERON:0000068embryo stage	9.53e3 9.53e3	52.68 52.68	AEIR AEIR
UBERON:0000955	brain	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	1.01e4 1.01e4 1.09e4	49.91 49.91 45.95	AEIR AEIR AEIR
UBERON:0002048	lung	[+] 1 stage UBERON:0000104life cycle	1.01e4 1.01e4	49.85 49.85	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.02e4 1.02e4	49.45 49.45	AEIR AEIR
UBERON:0007144	embryonic post-anal tail	[+] 1 stage UBERON:0000068embryo stage	1.14e4 1.14e4	43.47 43.47	AEIR AEIR
UBERON:0005418	hindlimb bud	[+] 1 stage UBERON:0000068embryo stage	1.20e4 1.20e4	40.54 40.54	AEIR AEIR
UBERON:0008812	hemipenis	[+] 1 stage UBERON:0000068embryo stage	1.22e4 1.22e4	39.21 39.21	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Cross-references

Ensembl	ENSACAG00000013485 (VDR)
HGNC	HGNC:12679 (VDR)
Uniprot/SPTREMBL	G1KNX9, G1KNX9_ANOCA