A. carolinensis Gene: PFDN1 - ENSACAG00000013539 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000013539
NamePFDN1
Descriptionprefoldin subunit 1 [Source:HGNC Symbol;Acc:HGNC:8866]
OrganismAnolis carolinensis (green anole)
Synonym(s)pfd1
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
233
  • 233
98.85
  • 98.85
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
367
  • 367
98.18
  • 98.18
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
395
  • 395
98.04
  • 98.04
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
431
  • 431
97.87
  • 97.87
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
437
  • 437
  • 688
97.83
  • 97.83
  • 96.59
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
462
  • 462
  • 1.55e3
97.71
  • 97.71
  • 92.32
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
481
  • 481
  • 1.17e3
97.62
  • 97.62
  • 94.18
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
493
  • 493
97.56
  • 97.56
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
610
  • 610
  • 884
96.98
  • 96.98
  • 95.62
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.07e3
  • 1.07e3
94.71
  • 94.71
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.07e3
  • 1.07e3
94.70
  • 94.70
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.29e3
  • 1.29e3
93.61
  • 93.61
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
1.69e3
  • 1.69e3
91.60
  • 91.60
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
3.18e3
  • 3.18e3
84.22
  • 84.22
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
4.43e3
  • 4.43e3
78.01
  • 78.01
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota15 species16 genesCompare expression
Tetrapoda16 species17 genesCompare expression
Euteleostomi17 species18 genesCompare expression
Bilateria24 species25 genesCompare expression

Orthology information comes from OMA : ENSACAG00000013539.

Cross-references

EnsemblENSACAG00000013539 (PFDN1)
HGNCHGNC:8866 (PFDN1)
Uniprot/SPTREMBLG1KNY0, G1KNY0_ANOCA

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