A. carolinensis Gene: SNRPA - ENSACAG00000013557 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000013557
NameSNRPA
Descriptionsmall nuclear ribonucleoprotein polypeptide A [Source:HGNC Symbol;Acc:HGNC:11151]
OrganismAnolis carolinensis (green anole)
Synonym(s)mud1, u1-a, u1a
Orthologs(s)25 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
734
  • 734
96.36
  • 96.36
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
923
  • 923
95.42
  • 95.42
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
2.12e3
  • 2.12e3
89.50
  • 89.50
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
2.62e3
  • 2.62e3
87.00
  • 87.00
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
2.64e3
  • 2.64e3
86.90
  • 86.90
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
3.04e3
  • 3.04e3
84.93
  • 84.93
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
3.54e3
  • 3.54e3
82.44
  • 82.44
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
3.56e3
  • 3.56e3
82.33
  • 82.33
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.93e3
  • 3.93e3
  • 5.09e3
80.52
  • 80.52
  • 74.75
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.12e3
  • 4.12e3
  • 4.51e3
79.55
  • 79.55
  • 77.61
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.75e3
  • 4.75e3
  • 5.39e3
76.43
  • 76.43
  • 73.23
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
6.64e3
  • 6.64e3
67.04
  • 67.04
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
7.19e3
  • 7.19e3
64.29
  • 64.29
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Amniota14 species15 genesCompare expression
Tetrapoda15 species16 genesCompare expression
Euteleostomi16 species17 genesCompare expression
Bilateria23 species25 genesCompare expression

Orthology information comes from OMA : ENSACAG00000013557.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression

Paralogy information comes from OMA : ENSACAG00000013557.

Cross-references

EnsemblENSACAG00000013557 (SNRPA)
HGNCHGNC:11151 (SNRPA)
Uniprot/SPTREMBLH9GK03, H9GK03_ANOCA

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