Gene: PDLIM5 - ENSACAG00000013613 - Anolis carolinensis (green anole)

General information

Ensembl ID	ENSACAG00000013613
Name	PDLIM5
Description	PDZ and LIM domain 5 [Source:HGNC Symbol;Acc:HGNC:17468]
Organism	Anolis carolinensis (green anole)
Synonym(s)	enh, lim

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0001134	skeletal muscle tissue	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	221 221 397	98.91 98.91 98.03	AEIR AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	352 352 391	98.26 98.26 98.06	AEIR AEIR AEIR
UBERON:0005418	hindlimb bud	[+] 1 stage UBERON:0000068embryo stage	2.91e3 2.91e3	85.57 85.57	AEIR AEIR
UBERON:1000003	dewlap	[+] 1 stage UBERON:0000104life cycle	3.35e3 3.35e3	83.35 83.35	AEIR AEIR
UBERON:0008812	hemipenis	[+] 1 stage UBERON:0000068embryo stage	3.52e3 3.52e3	82.53 82.53	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000104life cycle	3.88e3 3.88e3	80.74 80.74	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000104life cycle	3.91e3 3.91e3	80.61 80.61	AEIR AEIR
UBERON:0002048	lung	[+] 1 stage UBERON:0000104life cycle	4.17e3 4.17e3	79.29 79.29	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	4.55e3 4.55e3	77.42 77.42	AEIR AEIR
UBERON:0005417	forelimb bud	[+] 1 stage UBERON:0000068embryo stage	5.13e3 5.13e3	74.56 74.56	AEIR AEIR
UBERON:0007144	embryonic post-anal tail	[+] 1 stage UBERON:0000068embryo stage	5.48e3 5.48e3	72.80 72.80	AEIR AEIR
UBERON:0000955	brain	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	7.06e3 7.06e3 1.09e4	64.93 64.93 45.97	AEIR AEIR AEIR
UBERON:0002369	adrenal gland	[+] 1 stage UBERON:0000104life cycle	7.26e3 7.26e3	63.95 63.95	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Cross-references

Ensembl	ENSACAG00000013613 (PDLIM5)
HGNC	HGNC:17468 (PDLIM5)
Uniprot/SPTREMBL	G1KP32, G1KP32_ANOCA, R4GBW1, R4GBW1_ANOCA