A. carolinensis Gene: TM6SF1 - ENSACAG00000013723 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000013723
NameTM6SF1
Descriptiontransmembrane 6 superfamily member 1 [Source:HGNC Symbol;Acc:HGNC:11860]
OrganismAnolis carolinensis (green anole)
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.08e3
  • 2.08e3
  • 3.31e3
89.70
  • 89.70
  • 83.56
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
5.08e3
  • 5.08e3
74.76
  • 74.76
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
6.15e3
  • 6.15e3
69.45
  • 69.45
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.46e3
  • 6.46e3
  • 7.71e3
67.92
  • 67.92
  • 61.72
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
6.71e3
  • 6.71e3
  • 9.97e3
66.67
  • 66.67
  • 50.50
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.04e3
  • 7.04e3
  • 7.52e3
65.07
  • 65.07
  • 62.69
AEIR
  • AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
7.95e3
  • 7.95e3
60.54
  • 60.54
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
8.80e3
  • 8.80e3
56.30
  • 56.30
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
8.93e3
  • 8.93e3
55.69
  • 55.69
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
9.21e3
  • 9.21e3
54.28
  • 54.28
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
9.79e3
  • 9.79e3
51.40
  • 51.40
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.02e4
  • 1.02e4
49.23
  • 49.23
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
43.02
  • 43.02
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.22e4
  • 1.22e4
39.26
  • 39.26
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
38.15
  • 38.15
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression

Orthology information comes from OMA : ENSACAG00000013723.

Cross-references

EnsemblENSACAG00000013723 (TM6SF1)
HGNCHGNC:11860 (TM6SF1)
Uniprot/SPTREMBLH9GK56, H9GK56_ANOCA

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