A. carolinensis Gene: C15orf40 - ENSACAG00000013806 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000013806
NameC15orf40
Descriptionchromosome 15 open reading frame 40 [Source:HGNC Symbol;Acc:HGNC:28443]
OrganismAnolis carolinensis (green anole)
Synonym(s)mgc29937
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
784
  • 784
  • 885
96.11
  • 96.11
  • 95.61
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
901
  • 901
95.53
  • 95.53
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.80e3
  • 1.80e3
  • 3.03e3
91.07
  • 91.07
  • 84.95
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.84e3
  • 1.84e3
90.89
  • 90.89
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.98e3
  • 1.98e3
90.20
  • 90.20
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
2.02e3
  • 2.02e3
89.96
  • 89.96
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.09e3
  • 2.09e3
  • 4.79e3
89.61
  • 89.61
  • 76.20
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.33e3
  • 2.33e3
88.44
  • 88.44
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.40e3
  • 2.40e3
  • 6.08e3
88.07
  • 88.07
  • 69.82
AEIR
  • AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
3.24e3
  • 3.24e3
83.92
  • 83.92
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
3.37e3
  • 3.37e3
83.28
  • 83.28
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
3.92e3
  • 3.92e3
80.55
  • 80.55
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
6.18e3
  • 6.18e3
69.33
  • 69.33
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
6.25e3
  • 6.25e3
68.99
  • 68.99
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
6.64e3
  • 6.64e3
67.06
  • 67.06
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota15 species17 genesCompare expression
Tetrapoda16 species18 genesCompare expression

Orthology information comes from OMA : ENSACAG00000013806.

Cross-references

EnsemblENSACAG00000013806 (C15orf40)
HGNCHGNC:28443 (C15orf40)
Uniprot/SPTREMBLH9GKA2, H9GKA2_ANOCA

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