A. carolinensis Gene: LRRC40 - ENSACAG00000013810 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000013810
NameLRRC40
Descriptionleucine rich repeat containing 40 [Source:HGNC Symbol;Acc:HGNC:26004]
OrganismAnolis carolinensis (green anole)
Synonym(s)flj20331
Orthologs(s)24 orthologs
Paralog(s)289 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
4.18e3
  • 4.18e3
  • 5.93e3
79.26
  • 79.26
  • 70.54
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
4.63e3
  • 4.63e3
77.03
  • 77.03
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.13e3
  • 5.13e3
  • 7.53e3
74.54
  • 74.54
  • 62.63
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
5.42e3
  • 5.42e3
73.10
  • 73.10
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.51e3
  • 5.51e3
  • 7.63e3
72.65
  • 72.65
  • 62.10
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
5.55e3
  • 5.55e3
72.44
  • 72.44
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.90e3
  • 5.90e3
  • 9.96e3
70.69
  • 70.69
  • 50.53
AEIR
  • AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
6.22e3
  • 6.22e3
69.11
  • 69.11
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
6.36e3
  • 6.36e3
68.43
  • 68.43
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
6.48e3
  • 6.48e3
67.86
  • 67.86
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
6.65e3
  • 6.65e3
66.96
  • 66.96
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
6.98e3
  • 6.98e3
65.35
  • 65.35
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
7.08e3
  • 7.08e3
64.86
  • 64.86
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
7.30e3
  • 7.30e3
63.77
  • 63.77
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
8.79e3
  • 8.79e3
56.36
  • 56.36
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSACAG00000013810.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Eukaryota289 genesCompare expression

Paralogy information comes from OMA : ENSACAG00000013810.

Cross-references

EnsemblENSACAG00000013810 (LRRC40)
HGNCHGNC:26004 (LRRC40)
Uniprot/SPTREMBLH9GKE0, H9GKE0_ANOCA

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