Gene: SYT1 - ENSACAG00000013826 - Anolis carolinensis (green anole)

General information

Ensembl ID	ENSACAG00000013826
Name	SYT1
Description	synaptotagmin 1 [Source:HGNC Symbol;Acc:HGNC:11509]
Organism	Anolis carolinensis (green anole)
Synonym(s)	p65, svp65, syt
Orthologs(s)	19 orthologs
Paralog(s)	2 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000955	brain	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	344 344 6.56e3	98.30 98.30 67.44	AEIR AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000113post-juvenile adult stage	379 379	98.12 98.12	AEIR AEIR
UBERON:0005417	forelimb bud	[+] 1 stage UBERON:0000068embryo stage	6.95e3 6.95e3	65.52 65.52	AEIR AEIR
UBERON:0002369	adrenal gland	[+] 1 stage UBERON:0000104life cycle	7.56e3 7.56e3	62.45 62.45	AEIR AEIR
UBERON:0008812	hemipenis	[+] 1 stage UBERON:0000068embryo stage	8.29e3 8.29e3	58.87 58.87	AEIR AEIR
UBERON:0007144	embryonic post-anal tail	[+] 1 stage UBERON:0000068embryo stage	8.74e3 8.74e3	56.63 56.63	AEIR AEIR
UBERON:0005418	hindlimb bud	[+] 1 stage UBERON:0000068embryo stage	8.87e3 8.87e3	55.94 55.94	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000104life cycle	1.07e4 1.07e4	46.68 46.68	AEIR AEIR
UBERON:1000003	dewlap	[+] 1 stage UBERON:0000104life cycle	1.07e4 1.07e4	46.65 46.65	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	1.14e4 1.14e4 1.30e4	43.28 43.28 35.64	AEIR AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.27e4 1.27e4	36.88 36.88	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Sauria	1 species Gallus gallus (chicken)	1 gene ENSGALG00000010319 SYT1	Compare expression	[+]
Amniota	17 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken)	17 genes ENSG00000067715 SYT1 ENSMUSG00000035864 Syt1 ENSPTRG00000024064 SYT1 ENSGGOG00000024224 SYT1 ENSMMUG00000005530 SYT1 ENSRNOG00000006426 Syt1 ENSBTAG00000034693 SYT1 ENSSSCG00000000948 SYT1 ENSECAG00000012832 SYT1 ENSOCUG00000014829 SYT1 ENSCAFG00000005766 SYT1 ENSFCAG00000030841 SYT1 ENSCPOG00000002054 SYT1 ENSEEUG00000007768 SYT1 ENSMODG00000020467 SYT1 ENSOANG00000007531 SYT1 ENSGALG00000010319 SYT1	Compare expression	[+]
Tetrapoda	18 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog)	18 genes ENSG00000067715 SYT1 ENSMUSG00000035864 Syt1 ENSPTRG00000024064 SYT1 ENSGGOG00000024224 SYT1 ENSMMUG00000005530 SYT1 ENSRNOG00000006426 Syt1 ENSBTAG00000034693 SYT1 ENSSSCG00000000948 SYT1 ENSECAG00000012832 SYT1 ENSOCUG00000014829 SYT1 ENSCAFG00000005766 SYT1 ENSFCAG00000030841 SYT1 ENSCPOG00000002054 SYT1 ENSEEUG00000007768 SYT1 ENSMODG00000020467 SYT1 ENSOANG00000007531 SYT1 ENSGALG00000010319 SYT1 ENSXETG00000004068 syt1	Compare expression	[+]
Euteleostomi	19 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog)	19 genes ENSG00000067715 SYT1 ENSMUSG00000035864 Syt1 ENSDARG00000030614 syt1a ENSPTRG00000024064 SYT1 ENSGGOG00000024224 SYT1 ENSMMUG00000005530 SYT1 ENSRNOG00000006426 Syt1 ENSBTAG00000034693 SYT1 ENSSSCG00000000948 SYT1 ENSECAG00000012832 SYT1 ENSOCUG00000014829 SYT1 ENSCAFG00000005766 SYT1 ENSFCAG00000030841 SYT1 ENSCPOG00000002054 SYT1 ENSEEUG00000007768 SYT1 ENSMODG00000020467 SYT1 ENSOANG00000007531 SYT1 ENSGALG00000010319 SYT1 ENSXETG00000004068 syt1	Compare expression	[+]

Orthology information comes from OMA : ENSACAG00000013826.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Chordata	2 genes ENSACAG00000003847 SYT2 ENSACAG00000017137 SYT5	Compare expression	[+]

Paralogy information comes from OMA : ENSACAG00000013826.

Cross-references

Ensembl	ENSACAG00000013826 (SYT1)
HGNC	HGNC:11509 (SYT1)
Uniprot/SPTREMBL	G1KPD2, G1KPD2_ANOCA