A. carolinensis Gene: C1orf116 - ENSACAG00000013874 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000013874
NameC1orf116
Descriptionchromosome 1 open reading frame 116 [Source:HGNC Symbol;Acc:HGNC:28667]
OrganismAnolis carolinensis (green anole)
Synonym(s)flj36507, mgc2742, mgc4309, sarg
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0000104life cycle
2.31e3
  • 2.31e3
88.55
  • 88.55
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
2.80e3
  • 2.80e3
86.10
  • 86.10
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
3.01e3
  • 3.01e3
85.05
  • 85.05
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
4.49e3
  • 4.49e3
77.70
  • 77.70
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
5.34e3
  • 5.34e3
73.49
  • 73.49
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.21e4
  • 1.21e4
  • 1.37e4
39.79
  • 39.79
  • 31.96
AEIR
  • AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
1.25e4
  • 1.25e4
37.79
  • 37.79
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
1.26e4
  • 1.26e4
  • 1.29e4
37.34
  • 37.34
  • 35.80
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.33e4
  • 1.33e4
34.01
  • 34.01
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.35e4
  • 1.35e4
  • 1.41e4
32.74
  • 32.74
  • 29.79
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
  • 1.51e4
26.64
  • 26.64
  • 25.04
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression

Orthology information comes from OMA : ENSACAG00000013874.

Cross-references

EnsemblENSACAG00000013874 (C1orf116)
HGNCHGNC:28667 (C1orf116)
Uniprot/SPTREMBLH9GKC4, H9GKC4_ANOCA

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