A. carolinensis Gene: RPAP1 - ENSACAG00000013988 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000013988
NameRPAP1
DescriptionRNA polymerase II associated protein 1 [Source:HGNC Symbol;Acc:HGNC:24567]
OrganismAnolis carolinensis (green anole)
Synonym(s)dkfzp727m111, flj12732, kiaa1403, mgc858
Orthologs(s)23 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
3.95e3
  • 3.95e3
80.37
  • 80.37
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
4.13e3
  • 4.13e3
79.49
  • 79.49
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
4.37e3
  • 4.37e3
78.33
  • 78.33
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
4.60e3
  • 4.60e3
77.18
  • 77.18
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
5.96e3
  • 5.96e3
70.39
  • 70.39
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.08e3
  • 6.08e3
  • 7.91e3
69.82
  • 69.82
  • 60.73
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.27e3
  • 6.27e3
  • 8.27e3
68.86
  • 68.86
  • 58.96
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.42e3
  • 6.42e3
  • 8.06e3
68.11
  • 68.11
  • 60.00
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
6.62e3
  • 6.62e3
67.12
  • 67.12
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
7.78e3
  • 7.78e3
61.39
  • 61.39
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
8.14e3
  • 8.14e3
59.58
  • 59.58
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
8.47e3
  • 8.47e3
57.93
  • 57.93
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
8.78e3
  • 8.78e3
56.40
  • 56.40
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
9.21e3
  • 9.21e3
54.26
  • 54.26
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSACAG00000013988.

Cross-references

EnsemblENSACAG00000013988 (RPAP1)
HGNCHGNC:24567 (RPAP1)
Uniprot/SPTREMBLG1KPH2, G1KPH2_ANOCA

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