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A. carolinensis Gene: SLC40A1 - ENSACAG00000014417 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000014417
NameSLC40A1
Descriptionsolute carrier family 40 (iron-regulated transporter), member 1 [Source:HGNC Symbol;Acc:HGNC:10909]
OrganismAnolis carolinensis (green anole)
Synonym(s)fpn1, hfe4, ireg1, mtp1, slc11a3
Orthologs(s)21 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0000104life cycle
926
  • 926
95.41
  • 95.41
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.36e3
  • 1.36e3
93.26
  • 93.26
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
2.11e3
  • 2.11e3
89.51
  • 89.51
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.57e3
  • 2.57e3
  • 4.94e3
87.22
  • 87.22
  • 75.49
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.48e3
  • 3.48e3
  • 5.45e3
82.74
  • 82.74
  • 72.95
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
5.15e3
  • 5.15e3
74.42
  • 74.42
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
6.48e3
  • 6.48e3
67.81
  • 67.81
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
6.72e3
  • 6.72e3
66.63
  • 66.63
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.73e3
  • 6.73e3
  • 9.15e3
66.61
  • 66.61
  • 54.57
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
7.66e3
  • 7.66e3
61.98
  • 61.98
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
8.17e3
  • 8.17e3
59.44
  • 59.44
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
9.23e3
  • 9.23e3
54.18
  • 54.18
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
1.01e4
  • 1.01e4
50.03
  • 50.03
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
42.91
  • 42.91
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species17 genesCompare expression
Tetrapoda17 species18 genesCompare expression
Euteleostomi18 species19 genesCompare expression
Bilateria19 species21 genesCompare expression

Orthology information comes from OMA : ENSACAG00000014417.

Cross-references

EnsemblENSACAG00000014417 (SLC40A1)
HGNCHGNC:10909 (SLC40A1)
Uniprot/SPTREMBLH9GL46, H9GL46_ANOCA

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