A. carolinensis Gene: LDB3 - ENSACAG00000014492 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000014492
NameLDB3
DescriptionLIM domain binding 3 [Source:HGNC Symbol;Acc:HGNC:15710]
OrganismAnolis carolinensis (green anole)
Synonym(s)cmd1c, kiaa0613, pdlim6, zasp
Orthologs(s)16 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
183
  • 183
  • 211
99.10
  • 99.10
  • 98.96
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
322
  • 322
  • 341
98.41
  • 98.41
  • 98.31
AEIR
  • AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
7.74e3
  • 7.74e3
61.56
  • 61.56
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
9.14e3
  • 9.14e3
54.64
  • 54.64
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
9.68e3
  • 9.68e3
51.94
  • 51.94
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.00e4
  • 1.00e4
  • 1.14e4
50.32
  • 50.32
  • 43.42
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
  • 1.06e4
48.94
  • 48.94
  • 47.21
AEIR
  • AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
1.14e4
  • 1.14e4
43.45
  • 43.45
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
1.39e4
  • 1.39e4
31.07
  • 31.07
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.47e4
  • 1.47e4
27.13
  • 27.13
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSACAG00000014492.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Eumetazoa2 genesCompare expression

Paralogy information comes from OMA : ENSACAG00000014492.

Cross-references

EnsemblENSACAG00000014492 (LDB3)
HGNCHGNC:15710 (LDB3)
Uniprot/SPTREMBLH9GL67, H9GL67_ANOCA

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