Gene: LIMD1 - ENSACAG00000014552 - Anolis carolinensis (green anole)

General information

Ensembl ID	ENSACAG00000014552
Name	LIMD1
Description	LIM domains containing 1 [Source:HGNC Symbol;Acc:HGNC:6612]
Organism	Anolis carolinensis (green anole)
Orthologs(s)	17 orthologs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000948	heart	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	2.95e3 2.95e3 3.12e3	85.38 85.38 84.54	AEIR AEIR AEIR
UBERON:0001134	skeletal muscle tissue	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	3.01e3 3.01e3 3.32e3	85.05 85.05 83.51	AEIR AEIR AEIR
UBERON:0005418	hindlimb bud	[+] 1 stage UBERON:0000068embryo stage	3.49e3 3.49e3	82.67 82.67	AEIR AEIR
UBERON:0002048	lung	[+] 1 stage UBERON:0000104life cycle	4.03e3 4.03e3	79.99 79.99	AEIR AEIR
UBERON:0005417	forelimb bud	[+] 1 stage UBERON:0000068embryo stage	4.23e3 4.23e3	79.02 79.02	AEIR AEIR
UBERON:0002369	adrenal gland	[+] 1 stage UBERON:0000104life cycle	4.36e3 4.36e3	78.37 78.37	AEIR AEIR
UBERON:0008812	hemipenis	[+] 1 stage UBERON:0000068embryo stage	4.61e3 4.61e3	77.13 77.13	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000104life cycle	5.18e3 5.18e3	74.29 74.29	AEIR AEIR
UBERON:0007144	embryonic post-anal tail	[+] 1 stage UBERON:0000068embryo stage	5.82e3 5.82e3	71.09 71.09	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	6.63e3 6.63e3	67.07 67.07	AEIR AEIR
UBERON:1000003	dewlap	[+] 1 stage UBERON:0000104life cycle	7.63e3 7.63e3	62.11 62.11	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000104life cycle	8.10e3 8.10e3	59.79 59.79	AEIR AEIR
UBERON:0000955	brain	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	9.79e3 9.79e3 1.00e4	51.40 51.40 50.21	AEIR AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Sauria	1 species Gallus gallus (chicken)	1 gene ENSGALG00000011848 LIMD1	Compare expression	[+]
Amniota	16 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken)	16 genes ENSG00000144791 LIMD1 ENSMUSG00000025239 Limd1 ENSPTRG00000014835 LIMD1 ENSGGOG00000002756 LIMD1 ENSMMUG00000010711 LIMD1 ENSRNOG00000004837 Limd1 ENSBTAG00000026097 LIMD1 ENSSSCG00000011313 ENSECAG00000024189 LIMD1 ENSOCUG00000001984 LIMD1 ENSCAFG00000014013 LIMD1 ENSFCAG00000031843 LIMD1 ENSCPOG00000001164 LIMD1 ENSMODG00000011317 LIMD1 ENSOANG00000006799 LIMD1 ENSGALG00000011848 LIMD1	Compare expression	[+]
Euteleostomi	17 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken)	17 genes ENSG00000144791 LIMD1 ENSMUSG00000025239 Limd1 ENSDARG00000077964 LIMD1 ENSPTRG00000014835 LIMD1 ENSGGOG00000002756 LIMD1 ENSMMUG00000010711 LIMD1 ENSRNOG00000004837 Limd1 ENSBTAG00000026097 LIMD1 ENSSSCG00000011313 ENSECAG00000024189 LIMD1 ENSOCUG00000001984 LIMD1 ENSCAFG00000014013 LIMD1 ENSFCAG00000031843 LIMD1 ENSCPOG00000001164 LIMD1 ENSMODG00000011317 LIMD1 ENSOANG00000006799 LIMD1 ENSGALG00000011848 LIMD1	Compare expression	[+]

Orthology information comes from OMA : ENSACAG00000014552.

Cross-references

Ensembl	ENSACAG00000014552 (LIMD1)
HGNC	HGNC:6612 (LIMD1)
Uniprot/SPTREMBL	H9G574, H9G574_ANOCA, H9GL91, H9GL91_ANOCA