A. carolinensis Gene: LIG4 - ENSACAG00000014566 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000014566
NameLIG4
Descriptionligase IV, DNA, ATP-dependent [Source:HGNC Symbol;Acc:HGNC:6601]
OrganismAnolis carolinensis (green anole)
Orthologs(s)22 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.63e3
  • 2.63e3
86.94
  • 86.94
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
3.06e3
  • 3.06e3
84.79
  • 84.79
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
3.14e3
  • 3.14e3
84.40
  • 84.40
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
3.17e3
  • 3.17e3
84.25
  • 84.25
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
4.89e3
  • 4.89e3
75.72
  • 75.72
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
5.86e3
  • 5.86e3
70.93
  • 70.93
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.98e3
  • 5.98e3
  • 8.82e3
70.31
  • 70.31
  • 56.22
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.02e3
  • 6.02e3
  • 8.17e3
70.09
  • 70.09
  • 59.43
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
6.31e3
  • 6.31e3
68.69
  • 68.69
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
6.83e3
  • 6.83e3
66.08
  • 66.08
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
6.94e3
  • 6.94e3
65.54
  • 65.54
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
7.20e3
  • 7.20e3
64.25
  • 64.25
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.36e3
  • 7.36e3
  • 8.60e3
63.45
  • 63.45
  • 57.30
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
47.83
  • 47.83
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSACAG00000014566.

Cross-references

EnsemblENSACAG00000014566 (LIG4)
HGNCHGNC:6601 (LIG4)
Uniprot/SPTREMBLG1KPZ8, G1KPZ8_ANOCA

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