A. carolinensis Gene: SMIM20 - ENSACAG00000014567 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000014567
NameSMIM20
Descriptionsmall integral membrane protein 20 [Source:HGNC Symbol;Acc:HGNC:37260]
OrganismAnolis carolinensis (green anole)
Synonym(s)c4orf52
Orthologs(s)1 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
331
  • 331
98.36
  • 98.36
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
368
  • 368
  • 6.21e3
98.18
  • 98.18
  • 69.16
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
417
  • 417
  • 464
97.93
  • 97.93
  • 97.70
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
440
  • 440
  • 501
97.82
  • 97.82
  • 97.52
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
455
  • 455
97.74
  • 97.74
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
596
  • 596
  • 3.08e3
97.04
  • 97.04
  • 84.73
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
615
  • 615
96.95
  • 96.95
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
696
  • 696
96.55
  • 96.55
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
733
  • 733
96.37
  • 96.37
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.03e3
  • 1.03e3
94.88
  • 94.88
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
3.88e3
  • 3.88e3
80.75
  • 80.75
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
4.27e3
  • 4.27e3
78.79
  • 78.79
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
5.67e3
  • 5.67e3
71.88
  • 71.88
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
6.10e3
  • 6.10e3
69.74
  • 69.74
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
9.81e3
  • 9.81e3
51.31
  • 51.31
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression

Orthology information comes from OMA : ENSACAG00000014567.

Cross-references

EnsemblENSACAG00000014567 (SMIM20)
HGNCHGNC:37260 (SMIM20)
Uniprot/SPTREMBLH9GL83, H9GL83_ANOCA

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