A. carolinensis Gene: ASTN1 - ENSACAG00000014579 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000014579
NameASTN1
Descriptionastrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
OrganismAnolis carolinensis (green anole)
Synonym(s)astn
Orthologs(s)18 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
5.74e3
  • 5.74e3
71.49
  • 71.49
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.40e3
  • 6.40e3
  • 8.88e3
68.24
  • 68.24
  • 55.91
AEIR
  • AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
9.31e3
  • 9.31e3
53.76
  • 53.76
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.12e4
  • 1.12e4
  • 1.32e4
44.25
  • 44.25
  • 34.55
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
44.22
  • 44.22
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
1.19e4
  • 1.19e4
40.98
  • 40.98
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.21e4
  • 1.21e4
40.17
  • 40.17
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
37.25
  • 37.25
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSACAG00000014579.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSACAG00000014579.

Cross-references

EnsemblENSACAG00000014579 (ASTN1)
HGNCHGNC:773 (ASTN1)
Uniprot/SPTREMBLG1KQ39, G1KQ39_ANOCA

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