Gene: SYN3 - ENSACAG00000014584 - Anolis carolinensis (green anole)

General information

Ensembl ID	ENSACAG00000014584
Name	SYN3
Description	synapsin III [Source:HGNC Symbol;Acc:HGNC:11496]
Organism	Anolis carolinensis (green anole)
Orthologs(s)	5 orthologs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000955	brain	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	4.32e3 4.32e3 7.40e3	78.57 78.57 63.27	AEIR AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000113post-juvenile adult stage	4.97e3 4.97e3	75.32 75.32	AEIR AEIR
UBERON:0005418	hindlimb bud	[+] 1 stage UBERON:0000068embryo stage	7.61e3 7.61e3	62.24 62.24	AEIR AEIR
UBERON:0008812	hemipenis	[+] 1 stage UBERON:0000068embryo stage	7.87e3 7.87e3	60.92 60.92	AEIR AEIR
UBERON:0005417	forelimb bud	[+] 1 stage UBERON:0000068embryo stage	7.89e3 7.89e3	60.81 60.81	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	7.95e3 7.95e3 8.62e3	60.54 60.54 57.21	AEIR AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000104life cycle	1.05e4 1.05e4	48.06 48.06	AEIR AEIR
UBERON:1000003	dewlap	[+] 1 stage UBERON:0000104life cycle	1.06e4 1.06e4	47.53 47.53	AEIR AEIR
UBERON:0002048	lung	[+] 1 stage UBERON:0000104life cycle	1.20e4 1.20e4	40.46 40.46	AEIR AEIR
UBERON:0001134	skeletal muscle tissue	[+] 1 stage UBERON:0000104life cycle	1.32e4 1.32e4	34.43 34.43	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.32e4 1.32e4	34.42 34.42	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000104life cycle	1.35e4 1.35e4	32.97 32.97	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Amniota	5 species Bos taurus (cattle) Equus caballus (horse) Canis lupus familiaris (dog) Felis catus (cat) Erinaceus europaeus (hedgehog)	5 genes ENSBTAG00000020636 SYN3 ENSECAG00000019504 SYN3 ENSCAFG00000001752 SYN3 ENSFCAG00000009804 ENSEEUG00000014424 SYN3	Compare expression	[+]

Orthology information comes from OMA : ENSACAG00000014584.

Cross-references

Ensembl	ENSACAG00000014584 (SYN3)
HGNC	HGNC:11496 (SYN3)
Uniprot/SPTREMBL	G1KQ72, G1KQ72_ANOCA