A. carolinensis Gene: MSC - ENSACAG00000014585 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000014585
NameMSC
Descriptionmusculin [Source:HGNC Symbol;Acc:HGNC:7321]
OrganismAnolis carolinensis (green anole)
Synonym(s)abf-1, bhlha22
Orthologs(s)15 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.54e3
  • 2.54e3
  • 3.49e3
87.40
  • 87.40
  • 82.68
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
7.17e3
  • 7.17e3
  • 1.39e4
64.40
  • 64.40
  • 31.22
AEIR
  • AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
8.57e3
  • 8.57e3
57.47
  • 57.47
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
9.61e3
  • 9.61e3
  • 1.06e4
52.28
  • 52.28
  • 47.48
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
45.47
  • 45.47
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
43.12
  • 43.12
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.20e4
  • 1.20e4
40.60
  • 40.60
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
  • 1.72e4
37.72
  • 37.72
  • 14.56
AEIR
  • AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
37.06
  • 37.06
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
33.58
  • 33.58
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
29.90
  • 29.90
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Lepidosauria1 geneCompare expression

Paralogy information comes from OMA : ENSACAG00000014585.

Cross-references

EnsemblENSACAG00000014585 (MSC)
HGNCHGNC:7321 (MSC)
Uniprot/SPTREMBLG1K956, G1K956_ANOCA, G1KQ19, G1KQ19_ANOCA

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