Gene: SMCO4 - ENSACAG00000014597 - Anolis carolinensis (green anole)

General information

Ensembl ID	ENSACAG00000014597
Name	SMCO4
Description	single-pass membrane protein with coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:24810]
Organism	Anolis carolinensis (green anole)
Synonym(s)	c11orf75, fn5
Orthologs(s)	20 orthologs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0002369	adrenal gland	[+] 1 stage UBERON:0000104life cycle	135 135	99.33 99.33	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000104life cycle	159 159	99.22 99.22	AEIR AEIR
UBERON:1000003	dewlap	[+] 1 stage UBERON:0000104life cycle	244 244	98.79 98.79	AEIR AEIR
UBERON:0001134	skeletal muscle tissue	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	246 246 332	98.78 98.78 98.36	AEIR AEIR AEIR
UBERON:0002048	lung	[+] 1 stage UBERON:0000104life cycle	253 253	98.75 98.75	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000104life cycle	267 267	98.68 98.68	AEIR AEIR
UBERON:0000922	embryo	[+] 2 stages UBERON:0000104life cycle UBERON:0000068embryo stage	268 268 1.73e3	98.67 98.67 91.42	AEIR AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	486 486 855	97.59 97.59 95.76	AEIR AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	807 807	96.00 96.00	AEIR AEIR
UBERON:0005418	hindlimb bud	[+] 1 stage UBERON:0000068embryo stage	1.28e3 1.28e3	93.67 93.67	AEIR AEIR
UBERON:0000955	brain	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	1.64e3 1.64e3 6.13e3	91.86 91.86 69.55	AEIR AEIR AEIR
UBERON:0005417	forelimb bud	[+] 1 stage UBERON:0000068embryo stage	2.22e3 2.22e3	89.00 89.00	AEIR AEIR
UBERON:0008812	hemipenis	[+] 1 stage UBERON:0000068embryo stage	2.28e3 2.28e3	88.70 88.70	AEIR AEIR
UBERON:0007144	embryonic post-anal tail	[+] 1 stage UBERON:0000068embryo stage	2.98e3 2.98e3	85.18 85.18	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000113post-juvenile adult stage	9.49e3 9.49e3	52.90 52.90	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Sauria	1 species Gallus gallus (chicken)	1 gene ENSGALG00000026639 C11ORF75	Compare expression	[+]
Amniota	10 species Homo sapiens (human) Mus musculus (mouse) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Bos taurus (cattle) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Gallus gallus (chicken)	12 genes ENSG00000166002 SMCO4 ENSMUSG00000058173 Smco4 ENSGGOG00000011166 ENSGGOG00000026779 SMCO4 ENSMMUG00000029928 ENSMMUG00000030946 SMCO4 ENSBTAG00000033621 SMCO4 ENSOCUG00000015530 SMCO4 ENSCPOG00000011652 SMCO4 ENSEEUG00000014220 SMCO4 ENSMODG00000024310 SMCO4 ENSGALG00000026639 C11ORF75	Compare expression	[+]
Tetrapoda	11 species Homo sapiens (human) Mus musculus (mouse) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Bos taurus (cattle) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog)	13 genes ENSG00000166002 SMCO4 ENSMUSG00000058173 Smco4 ENSGGOG00000011166 ENSGGOG00000026779 SMCO4 ENSMMUG00000029928 ENSMMUG00000030946 SMCO4 ENSBTAG00000033621 SMCO4 ENSOCUG00000015530 SMCO4 ENSCPOG00000011652 SMCO4 ENSEEUG00000014220 SMCO4 ENSMODG00000024310 SMCO4 ENSGALG00000026639 C11ORF75 ENSXETG00000024646 smco4	Compare expression	[+]
Euteleostomi	12 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Bos taurus (cattle) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog)	14 genes ENSG00000166002 SMCO4 ENSMUSG00000058173 Smco4 ENSDARG00000097824 smco4 ENSGGOG00000011166 ENSGGOG00000026779 SMCO4 ENSMMUG00000029928 ENSMMUG00000030946 SMCO4 ENSBTAG00000033621 SMCO4 ENSOCUG00000015530 SMCO4 ENSCPOG00000011652 SMCO4 ENSEEUG00000014220 SMCO4 ENSMODG00000024310 SMCO4 ENSGALG00000026639 C11ORF75 ENSXETG00000024646 smco4	Compare expression	[+]
Bilateria	18 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Drosophila melanogaster (fruit fly) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Bos taurus (cattle) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog) Drosophila ananassae Drosophila mojavensis Drosophila simulans Drosophila virilis Drosophila yakuba	20 genes ENSG00000166002 SMCO4 ENSMUSG00000058173 Smco4 ENSDARG00000097824 smco4 FBgn0053169 CG33169 ENSGGOG00000011166 ENSGGOG00000026779 SMCO4 ENSMMUG00000029928 ENSMMUG00000030946 SMCO4 ENSBTAG00000033621 SMCO4 ENSOCUG00000015530 SMCO4 ENSCPOG00000011652 SMCO4 ENSEEUG00000014220 SMCO4 ENSMODG00000024310 SMCO4 ENSGALG00000026639 C11ORF75 ENSXETG00000024646 smco4 FBgn0088042 GF11002 FBgn0136188 GI13432 FBgn0186727 GD15055 FBgn0199048 GJ11794 FBgn0239857 GE22643	Compare expression	[+]

Orthology information comes from OMA : ENSACAG00000014597.

Cross-references

Ensembl	ENSACAG00000014597 (SMCO4)
HGNC	HGNC:24810 (SMCO4)
Uniprot/SPTREMBL	G1KQ16, G1KQ16_ANOCA