A. carolinensis Gene: CHST1 - ENSACAG00000014634 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000014634
NameCHST1
Descriptioncarbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:1969]
OrganismAnolis carolinensis (green anole)
Synonym(s)c6st, ksgal6st
Orthologs(s)16 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.05e3
  • 3.05e3
  • 1.14e4
84.86
  • 84.86
  • 43.55
AEIR
  • AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
4.22e3
  • 4.22e3
79.06
  • 79.06
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
4.27e3
  • 4.27e3
78.79
  • 78.79
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
5.04e3
  • 5.04e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.11e3
  • 5.11e3
  • 6.02e3
74.64
  • 74.64
  • 70.14
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
6.09e3
  • 6.09e3
69.75
  • 69.75
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
6.85e3
  • 6.85e3
65.97
  • 65.97
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
7.21e3
  • 7.21e3
64.19
  • 64.19
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
9.49e3
  • 9.49e3
52.91
  • 52.91
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
9.67e3
  • 9.67e3
51.99
  • 51.99
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
9.73e3
  • 9.73e3
  • 1.18e4
51.69
  • 51.69
  • 41.55
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.20e4
  • 1.20e4
40.62
  • 40.62
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.36e4
  • 1.36e4
32.65
  • 32.65
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSACAG00000014634.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSACAG00000014634.

Cross-references

EnsemblENSACAG00000014634 (CHST1)
HGNCHGNC:1969 (CHST1)
Uniprot/SPTREMBLG1KQ31, G1KQ31_ANOCA

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