A. carolinensis Gene: COL5A2 - ENSACAG00000014738 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000014738
NameCOL5A2
Descriptioncollagen, type V, alpha 2 [Source:HGNC Symbol;Acc:HGNC:2210]
OrganismAnolis carolinensis (green anole)
Orthologs(s)18 orthologs
Paralog(s)289 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.52e3
  • 1.52e3
92.45
  • 92.45
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
1.56e3
  • 1.56e3
92.25
  • 92.25
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
3.01e3
  • 3.01e3
85.06
  • 85.06
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.77e3
  • 3.77e3
  • 5.07e3
81.28
  • 81.28
  • 74.83
AEIR
  • AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
4.82e3
  • 4.82e3
76.08
  • 76.08
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.80e3
  • 5.80e3
  • 9.12e3
71.20
  • 71.20
  • 54.70
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
7.35e3
  • 7.35e3
63.52
  • 63.52
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
8.83e3
  • 8.83e3
56.15
  • 56.15
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
9.07e3
  • 9.07e3
54.96
  • 54.96
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.00e4
  • 1.00e4
50.31
  • 50.31
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
  • 1.19e4
48.02
  • 48.02
  • 40.87
AEIR
  • AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.22e4
  • 1.22e4
39.64
  • 39.64
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
32.92
  • 32.92
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSACAG00000014738.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Bilateria4 genesCompare expression
Eukaryota289 genesCompare expression

Paralogy information comes from OMA : ENSACAG00000014738.

Cross-references

EnsemblENSACAG00000014738 (COL5A2)
HGNCHGNC:2210 (COL5A2)
Uniprot/SPTREMBLH9GLU4, H9GLU4_ANOCA

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