A. carolinensis Gene: PLEKHF1 - ENSACAG00000014842 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000014842
NamePLEKHF1
Descriptionpleckstrin homology and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20764]
OrganismAnolis carolinensis (green anole)
Synonym(s)appd, mgc4090, phafin1, zfyve15
Orthologs(s)16 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000104life cycle
6.50e3
  • 6.50e3
67.75
  • 67.75
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
6.54e3
  • 6.54e3
67.55
  • 67.55
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.14e3
  • 7.14e3
  • 8.94e3
64.57
  • 64.57
  • 55.64
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
7.22e3
  • 7.22e3
64.16
  • 64.16
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
7.36e3
  • 7.36e3
63.44
  • 63.44
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
7.78e3
  • 7.78e3
61.40
  • 61.40
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
8.28e3
  • 8.28e3
58.88
  • 58.88
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
8.29e3
  • 8.29e3
  • 8.49e3
58.86
  • 58.86
  • 57.87
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
9.27e3
  • 9.27e3
53.99
  • 53.99
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
48.87
  • 48.87
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
  • 1.16e4
43.58
  • 43.58
  • 42.50
AEIR
  • AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
27.69
  • 27.69
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression

Orthology information comes from OMA : ENSACAG00000014842.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta1 geneCompare expression

Paralogy information comes from OMA : ENSACAG00000014842.

Cross-references

EnsemblENSACAG00000014842 (PLEKHF1)
HGNCHGNC:20764 (PLEKHF1)
Uniprot/SPTREMBLH9GLJ8, H9GLJ8_ANOCA

Do not show this banner again