A. carolinensis Gene: PDZRN3 - ENSACAG00000014911 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000014911
NamePDZRN3
DescriptionPDZ domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:17704]
OrganismAnolis carolinensis (green anole)
Synonym(s)kiaa1095, lnx3, semacap3
Orthologs(s)18 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.57e3
  • 1.57e3
  • 1.93e3
92.23
  • 92.23
  • 90.44
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
2.28e3
  • 2.28e3
  • 6.94e3
88.67
  • 88.67
  • 65.53
AEIR
  • AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
3.76e3
  • 3.76e3
81.36
  • 81.36
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.49e3
  • 4.49e3
  • 4.71e3
77.72
  • 77.72
  • 76.63
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
4.66e3
  • 4.66e3
76.85
  • 76.85
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
4.91e3
  • 4.91e3
75.64
  • 75.64
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
5.35e3
  • 5.35e3
73.45
  • 73.45
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
5.57e3
  • 5.57e3
72.35
  • 72.35
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
5.85e3
  • 5.85e3
70.94
  • 70.94
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
7.42e3
  • 7.42e3
63.15
  • 63.15
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
9.67e3
  • 9.67e3
52.00
  • 52.00
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
9.74e3
  • 9.74e3
  • 1.10e4
51.65
  • 51.65
  • 45.61
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
48.09
  • 48.09
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
42.22
  • 42.22
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
33.88
  • 33.88
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota15 species16 genesCompare expression
Tetrapoda16 species17 genesCompare expression
Euteleostomi17 species18 genesCompare expression

Orthology information comes from OMA : ENSACAG00000014911.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Deuterostomia2 genesCompare expression

Paralogy information comes from OMA : ENSACAG00000014911.

Cross-references

EnsemblENSACAG00000014911 (PDZRN3)
HGNCHGNC:17704 (PDZRN3)
Uniprot/SPTREMBLG1KQH2, G1KQH2_ANOCA

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