A. carolinensis Gene: RTN1 - ENSACAG00000015060 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000015060
NameRTN1
Descriptionreticulon 1 [Source:HGNC Symbol;Acc:HGNC:10467]
OrganismAnolis carolinensis (green anole)
Synonym(s)nsp
Orthologs(s)9 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
483
  • 483
  • 4.66e3
97.61
  • 97.61
  • 76.86
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.08e3
  • 1.08e3
94.65
  • 94.65
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
49.39
  • 49.39
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
47.33
  • 47.33
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
47.28
  • 47.28
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
  • 1.16e4
44.68
  • 44.68
  • 42.31
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
  • 1.36e4
44.30
  • 44.30
  • 32.38
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
  • 1.35e4
37.49
  • 37.49
  • 32.93
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSACAG00000015060 (RTN1)
HGNCHGNC:10467 (RTN1)
Uniprot/SPTREMBLH9GLX2, H9GLX2_ANOCA

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