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A. carolinensis Gene: TMED1 - ENSACAG00000015386 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000015386
NameTMED1
Descriptiontransmembrane p24 trafficking protein 1 [Source:HGNC Symbol;Acc:HGNC:17291]
OrganismAnolis carolinensis (green anole)
Synonym(s)il1rl1l, il1rl1lg, mgc1270, p24g1, p24gamma1, st2l
Orthologs(s)31 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.32e3
  • 1.32e3
  • 1.65e3
93.47
  • 93.47
  • 91.83
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.79e3
  • 1.79e3
91.14
  • 91.14
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.14e3
  • 2.14e3
  • 2.58e3
89.40
  • 89.40
  • 87.20
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
2.87e3
  • 2.87e3
  • 1.18e4
85.75
  • 85.75
  • 41.66
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
2.94e3
  • 2.94e3
85.41
  • 85.41
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
3.17e3
  • 3.17e3
84.28
  • 84.28
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
3.20e3
  • 3.20e3
84.12
  • 84.12
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
3.59e3
  • 3.59e3
82.18
  • 82.18
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
3.63e3
  • 3.63e3
82.00
  • 82.00
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
3.84e3
  • 3.84e3
80.95
  • 80.95
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
4.38e3
  • 4.38e3
78.26
  • 78.26
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
4.59e3
  • 4.59e3
77.22
  • 77.22
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
4.99e3
  • 4.99e3
75.21
  • 75.21
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.67e3
  • 7.67e3
  • 8.45e3
61.93
  • 61.93
  • 58.04
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
9.97e3
  • 9.97e3
50.52
  • 50.52
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species18 genesCompare expression
Bilateria24 species31 genesCompare expression

Orthology information comes from OMA : ENSACAG00000015386.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Deuterostomia1 geneCompare expression
Opisthokonta3 genesCompare expression

Paralogy information comes from OMA : ENSACAG00000015386.

Cross-references

EnsemblENSACAG00000015386 (TMED1)
HGNCHGNC:17291 (TMED1)
Uniprot/SPTREMBLG1KR35, G1KR35_ANOCA

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