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A. carolinensis Gene: FAM78A - ENSACAG00000015476 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000015476
NameFAM78A
Descriptionfamily with sequence similarity 78 member A [Source:HGNC Symbol;Acc:HGNC:25465]
OrganismAnolis carolinensis (green anole)
Synonym(s)c9orf59, flj00024
Orthologs(s)18 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
149
  • 149
  • 514
99.27
  • 99.27
  • 97.45
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
815
  • 815
  • 1.38e3
95.96
  • 95.96
  • 93.15
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.71e3
  • 2.71e3
  • 6.11e3
86.56
  • 86.56
  • 69.66
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
3.39e3
  • 3.39e3
83.17
  • 83.17
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
4.67e3
  • 4.67e3
76.81
  • 76.81
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
6.73e3
  • 6.73e3
66.61
  • 66.61
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
8.30e3
  • 8.30e3
  • 2.00e4
58.77
  • 58.77
  • 0.79
AEIR
  • AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
1.15e4
  • 1.15e4
42.71
  • 42.71
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
41.05
  • 41.05
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
37.56
  • 37.56
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.29e4
  • 1.29e4
35.95
  • 35.95
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
29.83
  • 29.83
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSACAG00000015476.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSACAG00000015476.

Cross-references

EnsemblENSACAG00000015476 (FAM78A)
HGNCHGNC:25465 (FAM78A)
Uniprot/SPTREMBLH9GMD6, H9GMD6_ANOCA

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