A. carolinensis Gene: PPP1R42 - ENSACAG00000016443 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000016443
NamePPP1R42
Descriptionprotein phosphatase 1 regulatory subunit 42 [Source:HGNC Symbol;Acc:HGNC:33732]
OrganismAnolis carolinensis (green anole)
Synonym(s)dtr, lrrc67, tllr
Orthologs(s)18 orthologs
Paralog(s)289 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
8.34e3
  • 8.34e3
  • 1.43e4
58.59
  • 58.59
  • 29.20
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
8.54e3
  • 8.54e3
  • 1.45e4
57.61
  • 57.61
  • 28.16
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
8.54e3
  • 8.54e3
57.58
  • 57.58
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
9.74e3
  • 9.74e3
51.65
  • 51.65
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
9.78e3
  • 9.78e3
51.43
  • 51.43
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
9.82e3
  • 9.82e3
  • 1.19e4
51.25
  • 51.25
  • 40.85
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
48.01
  • 48.01
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.10e4
  • 1.10e4
45.47
  • 45.47
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
  • 1.62e4
43.99
  • 43.99
  • 19.55
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
42.34
  • 42.34
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
1.40e4
  • 1.40e4
30.25
  • 30.25
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSACAG00000016443.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota289 genesCompare expression

Paralogy information comes from OMA : ENSACAG00000016443.

Cross-references

EnsemblENSACAG00000016443 (PPP1R42)
HGNCHGNC:33732 (PPP1R42)
Uniprot/SPTREMBLG1KSL2, G1KSL2_ANOCA

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