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A. carolinensis Gene: KDM1A - ENSACAG00000016954 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000016954
NameKDM1A
Descriptionlysine (K)-specific demethylase 1A [Source:HGNC Symbol;Acc:HGNC:29079]
OrganismAnolis carolinensis (green anole)
Synonym(s)aof2, bhc110, kdm1, kiaa0601, lsd1
Orthologs(s)25 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
1.38e3
  • 1.38e3
  • 1.62e3
93.16
  • 93.16
  • 91.98
AEIR
  • AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
1.52e3
  • 1.52e3
92.44
  • 92.44
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.60e3
  • 1.60e3
92.08
  • 92.08
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
2.03e3
  • 2.03e3
89.91
  • 89.91
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.23e3
  • 2.23e3
88.94
  • 88.94
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.41e3
  • 3.41e3
  • 4.44e3
83.07
  • 83.07
  • 77.97
AEIR
  • AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
4.35e3
  • 4.35e3
78.41
  • 78.41
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.49e3
  • 4.49e3
  • 4.90e3
77.73
  • 77.73
  • 75.67
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
4.67e3
  • 4.67e3
76.84
  • 76.84
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.79e3
  • 4.79e3
  • 6.38e3
76.22
  • 76.22
  • 68.35
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
4.83e3
  • 4.83e3
76.04
  • 76.04
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
5.20e3
  • 5.20e3
74.18
  • 74.18
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
5.77e3
  • 5.77e3
71.36
  • 71.36
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
6.02e3
  • 6.02e3
70.11
  • 70.11
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
6.04e3
  • 6.04e3
70.02
  • 70.02
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSACAG00000016954.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota4 genesCompare expression

Paralogy information comes from OMA : ENSACAG00000016954.

Cross-references

EnsemblENSACAG00000016954 (KDM1A)
HGNCHGNC:29079 (KDM1A)
Uniprot/SPTREMBLH9GNT2, H9GNT2_ANOCA

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