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A. carolinensis Gene: SLC6A12 - ENSACAG00000025590 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000025590
NameSLC6A12
Descriptionsolute carrier family 6 (neurotransmitter transporter), member 12 [Source:HGNC Symbol;Acc:HGNC:11045]
OrganismAnolis carolinensis (green anole)
Synonym(s)bgt-1
Orthologs(s)15 orthologs
Paralog(s)16 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.98e3
  • 6.98e3
  • 1.30e4
65.35
  • 65.35
  • 35.24
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
7.39e3
  • 7.39e3
63.30
  • 63.30
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
8.39e3
  • 8.39e3
58.34
  • 58.34
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
9.68e3
  • 9.68e3
  • 1.45e4
51.93
  • 51.93
  • 27.93
AEIR
  • AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
1.03e4
  • 1.03e4
48.71
  • 48.71
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.14e4
  • 1.14e4
43.27
  • 43.27
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
40.29
  • 40.29
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.22e4
  • 1.22e4
39.60
  • 39.60
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.33e4
  • 1.33e4
  • 1.39e4
34.01
  • 34.01
  • 31.19
AEIR
  • AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
29.50
  • 29.50
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.46e4
  • 1.46e4
27.66
  • 27.66
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression

Orthology information comes from OMA : ENSACAG00000025590.

Paralogs (same species)

Cross-references

EnsemblENSACAG00000025590 (SLC6A12)
HGNCHGNC:11045 (SLC6A12)
Uniprot/SPTREMBLG1KY99, G1KY99_ANOCA

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