A. carolinensis Gene: PTX4 - ENSACAG00000027048 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000027048
NamePTX4
Descriptionpentraxin 4 [Source:HGNC Symbol;Acc:HGNC:14171]
OrganismAnolis carolinensis (green anole)
Synonym(s)c16orf38
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.52e3
  • 5.52e3
  • 7.91e3
72.61
  • 72.61
  • 60.72
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
41.77
  • 41.77
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
41.51
  • 41.51
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
  • 1.30e4
41.48
  • 41.48
  • 35.57
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
41.20
  • 41.20
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
38.80
  • 38.80
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
36.50
  • 36.50
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
  • 1.59e4
25.15
  • 25.15
  • 21.30
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSACAG00000027048.

Cross-references

EnsemblENSACAG00000027048 (PTX4)
HGNCHGNC:14171 (PTX4)
Uniprot/SPTREMBLH9GS77, H9GS77_ANOCA, H9GVB1, H9GVB1_ANOCA

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