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B. taurus Gene: SLC17A8 - ENSBTAG00000001088 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000001088
NameSLC17A8
Descriptionsolute carrier family 17 (vesicular glutamate transporter), member 8 [Source:HGNC Symbol;Acc:HGNC:20151]
OrganismBos taurus (cattle)
Synonym(s)dfna25, vglut3
Orthologs(s)25 orthologs
Paralog(s)34 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002116ileum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
  • 1.47e4
54.53
  • 54.53
  • 36.41
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
52.96
  • 52.96
AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
47.51
  • 47.51
AEIR
  • AEIR
UBERON:0001158descending colon
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
44.64
  • 44.64
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
  • 1.60e4
42.98
  • 42.98
  • 30.81
AEIR
  • AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
42.40
  • 42.40
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
40.66
  • 40.66
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
  • 1.54e4
  • 1.75e4
40.61
  • 40.61
  • 33.11
  • 24.14
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.40e4
  • 1.40e4
  • 1.56e4
  • 1.64e4
39.17
  • 39.17
  • 32.28
  • 28.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
38.96
  • 38.96
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
37.53
  • 37.53
AEIR
  • AEIR
UBERON:0003984uterine tube infundibulum
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
36.17
  • 36.17
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
1.49e4
  • 1.49e4
35.61
  • 35.61
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.49e4
  • 1.49e4
35.43
  • 35.43
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
34.84
  • 34.84
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
34.73
  • 34.73
AEIR
  • AEIR
UBERON:0012648ampulla of uterine tube
  • UBERON:0000104life cycle
1.54e4
  • 1.54e4
33.41
  • 33.41
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
1.54e4
  • 1.54e4
33.22
  • 33.22
AEIR
  • AEIR
UBERON:0002247uterine horn
  • UBERON:0018241prime adult stage
1.55e4
  • 1.55e4
32.73
  • 32.73
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
1.57e4
  • 1.57e4
32.17
  • 32.17
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.57e4
  • 1.57e4
31.93
  • 31.93
AEIR
  • AEIR
UBERON:0002110gall bladder
  • UBERON:0000104life cycle
1.61e4
  • 1.61e4
30.17
  • 30.17
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.63e4
  • 1.63e4
  • 1.71e4
29.39
  • 29.39
  • 25.97
AEIR
  • AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
1.67e4
  • 1.67e4
27.50
  • 27.50
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
1.68e4
  • 1.68e4
27.13
  • 27.13
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.80e4
  • 1.80e4
  • 2.04e4
22.13
  • 22.13
  • 11.51
AEIR
  • AEIR
  • AEIR
UBERON:0008285rumen epithelium
  • UBERON:0018241prime adult stage
1.84e4
  • 1.84e4
20.16
  • 20.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000001088.

Paralogs (same species)

Cross-references

EnsemblENSBTAG00000001088 (SLC17A8)
HGNCHGNC:20151 (SLC17A8)
EMBLDAAA02013675
Uniprot/SPTREMBLE1BA07, E1BA07_BOVIN

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