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B. taurus Gene: SLC17A2 - ENSBTAG00000002642 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000002642
NameSLC17A2
Descriptionsolute carrier family 17, member 2 [Source:HGNC Symbol;Acc:HGNC:10930]
OrganismBos taurus (cattle)
Synonym(s)npt3, slc34a1
Orthologs(s)13 orthologs
Paralog(s)34 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.45e3
  • 1.45e3
  • 1.47e3
  • 2.09e3
93.70
  • 93.70
  • 93.62
  • 90.96
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.56e3
  • 7.56e3
  • 2.05e4
67.22
  • 67.22
  • 11.03
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
37.20
  • 37.20
AEIR
  • AEIR
CL:0000711cumulus cell
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
33.72
  • 33.72
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0000104life cycle
1.56e4
  • 1.56e4
32.45
  • 32.45
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.59e4
  • 1.59e4
31.12
  • 31.12
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.67e4
  • 1.67e4
  • 1.83e4
27.63
  • 27.63
  • 20.64
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000104life cycle
1.80e4
  • 1.80e4
22.01
  • 22.01
AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
1.86e4
  • 1.86e4
19.52
  • 19.52
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000002642.

Paralogs (same species)

Cross-references

EnsemblENSBTAG00000002642 (SLC17A2)
HGNCHGNC:10930 (SLC17A2)
EMBLBC109616
Uniprot/SWISSPROTNPT3_BOVIN, Q32LF0

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