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B. taurus Gene: DBX1 - ENSBTAG00000002733 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000002733
NameDBX1
Descriptiondeveloping brain homeobox 1 [Source:HGNC Symbol;Acc:HGNC:33185]
OrganismBos taurus (cattle)
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001381semimembranosus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
  • 1.37e4
48.78
  • 48.78
  • 40.44
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
  • 2.10e4
46.39
  • 46.39
  • 8.77
AEIR
  • AEIR
  • AEIR
UBERON:0002512corpus luteum
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
44.38
  • 44.38
AEIR
  • AEIR
UBERON:0001375semitendinosus
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
  • 1.39e4
  • 1.74e4
42.69
  • 42.69
  • 39.89
  • 24.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
  • 1.38e4
41.56
  • 41.56
  • 40.29
AEIR
  • AEIR
  • AEIR
UBERON:0002000gluteal muscle
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
40.39
  • 40.39
AEIR
  • AEIR
UBERON:0001739laryngeal cartilage
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
38.93
  • 38.93
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.60e4
  • 1.60e4
30.55
  • 30.55
AEIR
  • AEIR
UBERON:0001111intercostal muscle
  • UBERON:0000104life cycle
1.60e4
  • 1.60e4
30.49
  • 30.49
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000104life cycle
1.71e4
  • 1.71e4
25.92
  • 25.92
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species16 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000002733.

Cross-references

EnsemblENSBTAG00000002733 (DBX1)
HGNCHGNC:33185 (DBX1)
EMBLBC142482
Uniprot/SWISSPROTA5PKG8, DBX1_BOVIN

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