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B. taurus Gene: CDH10 - ENSBTAG00000002845 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000002845
NameCDH10
Descriptioncadherin 10, type 2 (T2-cadherin) [Source:HGNC Symbol;Acc:HGNC:1749]
OrganismBos taurus (cattle)
Orthologs(s)17 orthologs
Paralog(s)11 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0018241prime adult stage
3.46e3
  • 3.46e3
85.02
  • 85.02
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0018241prime adult stage
3.69e3
  • 3.69e3
84.01
  • 84.01
AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
4.88e3
  • 4.88e3
78.87
  • 78.87
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
5.07e3
  • 5.07e3
78.04
  • 78.04
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000068embryo stage
5.78e3
  • 5.78e3
74.95
  • 74.95
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.99e3
  • 6.99e3
  • 1.09e4
69.72
  • 69.72
  • 52.85
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
7.30e3
  • 7.30e3
68.37
  • 68.37
AEIR
  • AEIR
UBERON:0016538temporal cortex
  • UBERON:0000104life cycle
7.41e3
  • 7.41e3
67.90
  • 67.90
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
7.72e3
  • 7.72e3
66.55
  • 66.55
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
8.94e3
  • 8.94e3
  • 1.01e4
  • 1.07e4
61.27
  • 61.27
  • 56.03
  • 53.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
9.28e3
  • 9.28e3
59.79
  • 59.79
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0000104life cycle
9.87e3
  • 9.87e3
57.23
  • 57.23
AEIR
  • AEIR
UBERON:0001886choroid plexus
  • UBERON:0018241prime adult stage
9.98e3
  • 9.98e3
56.74
  • 56.74
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
55.99
  • 55.99
AEIR
  • AEIR
CL:0000775neutrophil
  • UBERON:0018241prime adult stage
1.09e4
  • 1.09e4
52.71
  • 52.71
AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • UBERON:0018241prime adult stage
1.13e4
  • 1.13e4
51.06
  • 51.06
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
50.28
  • 50.28
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0018241prime adult stage
1.15e4
  • 1.15e4
50.15
  • 50.15
AEIR
  • AEIR
UBERON:0003126trachea
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
49.06
  • 49.06
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
  • 1.58e4
  • 1.66e4
47.69
  • 47.69
  • 31.48
  • 28.12
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0012648ampulla of uterine tube
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
45.47
  • 45.47
AEIR
  • AEIR
UBERON:0002198neurohypophysis
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
45.21
  • 45.21
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
43.54
  • 43.54
AEIR
  • AEIR
UBERON:0002081cardiac atrium
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
  • 1.36e4
41.25
  • 41.25
  • 41.21
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
  • 1.41e4
40.73
  • 40.73
  • 38.96
AEIR
  • AEIR
  • AEIR
UBERON:0002507abdominal lymph node
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
38.86
  • 38.86
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
38.78
  • 38.78
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
38.42
  • 38.42
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0018241prime adult stage
1.43e4
  • 1.43e4
38.21
  • 38.21
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
  • 1.88e4
38.16
  • 38.16
  • 18.52
AEIR
  • AEIR
  • AEIR
UBERON:0001103diaphragm
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
38.07
  • 38.07
AEIR
  • AEIR
UBERON:0015869retropharyngeal lymph node
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
37.92
  • 37.92
AEIR
  • AEIR
UBERON:0002196adenohypophysis
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
36.37
  • 36.37
AEIR
  • AEIR
UBERON:0004180mammary gland fat
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
35.69
  • 35.69
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
35.12
  • 35.12
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
35.03
  • 35.03
AEIR
  • AEIR
UBERON:0007625pigment epithelium of eye
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
34.62
  • 34.62
AEIR
  • AEIR
CL:0000711cumulus cell
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
34.34
  • 34.34
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.56e4
  • 1.56e4
32.34
  • 32.34
AEIR
  • AEIR
UBERON:0002110gall bladder
  • UBERON:0000104life cycle
1.56e4
  • 1.56e4
32.27
  • 32.27
AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
1.61e4
  • 1.61e4
30.11
  • 30.11
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.65e4
  • 1.65e4
  • 1.66e4
  • 1.68e4
28.31
  • 28.31
  • 27.99
  • 27.12
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000503theca cell
  • UBERON:0018241prime adult stage
1.67e4
  • 1.67e4
27.54
  • 27.54
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0018241prime adult stage
1.72e4
  • 1.72e4
25.37
  • 25.37
AEIR
  • AEIR
UBERON:0007365rumen
  • UBERON:0000112sexually immature stage
1.73e4
  • 1.73e4
25.15
  • 25.15
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.74e4
  • 1.74e4
  • 1.83e4
24.57
  • 24.57
  • 20.66
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.77e4
  • 1.77e4
23.34
  • 23.34
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000002845.

Paralogs (same species)

Cross-references

EnsemblENSBTAG00000002845 (CDH10)
HGNCHGNC:1749 (CDH10)
EMBLDAAA02050895
Uniprot/SPTREMBLE1BIA5, E1BIA5_BOVIN

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