B. taurus Gene: IRF6 - ENSBTAG00000002849 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000002849
NameIRF6
Descriptioninterferon regulatory factor 6 [Source:HGNC Symbol;Acc:HGNC:6121]
OrganismBos taurus (cattle)
Synonym(s)lps, ofc6, vws, vws1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0018241prime adult stage
3.32e3
  • 3.32e3
84.12202
  • 84.12202
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
3.43e3
  • 3.43e3
83.60073
  • 83.60073
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
4.23e3
  • 4.23e3
79.76491
  • 79.76491
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
6.04e3
  • 6.04e3
71.09087
  • 71.09087
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
50.87616
  • 50.87616
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.16e4
  • 1.16e4
44.64107
  • 44.64107
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
39.39927
  • 39.39927
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
36.00569
  • 36.00569
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
30.21107
  • 30.21107
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
30.05556
  • 30.05556
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBC123806, DAAA02043812
EnsemblENSBTAG00000002849 (IRF6)
HGNCHGNC:6121 (IRF6)
Uniprot/SPTREMBLG3MXW7, G3MXW7_BOVIN
Uniprot/SWISSPROTIRF6_BOVIN, Q08DD6

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