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B. taurus Gene: PGC - ENSBTAG00000003818 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000003818
NamePGC
Descriptionprogastricsin (pepsinogen C) [Source:HGNC Symbol;Acc:HGNC:8890]
OrganismBos taurus (cattle)
Orthologs(s)13 orthologs
Paralog(s)46 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0007358abomasum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
174
  • 174
  • 175
99.25
  • 99.25
  • 99.25
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000104life cycle
399
  • 399
98.27
  • 98.27
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
  • 1.56e4
45.50
  • 45.50
  • 32.51
AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
41.80
  • 41.80
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
39.66
  • 39.66
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
39.25
  • 39.25
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
  • 1.59e4
38.88
  • 38.88
  • 31.10
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.42e4
  • 1.42e4
  • 1.59e4
38.42
  • 38.42
  • 31.24
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.43e4
  • 1.43e4
  • 1.60e4
38.08
  • 38.08
  • 30.71
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
32.06
  • 32.06
AEIR
  • AEIR
UBERON:0016632isthmus of fallopian tube
  • UBERON:0000104life cycle
1.58e4
  • 1.58e4
31.51
  • 31.51
AEIR
  • AEIR
UBERON:0002247uterine horn
  • UBERON:0018241prime adult stage
1.59e4
  • 1.59e4
30.95
  • 30.95
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0000104life cycle
1.78e4
  • 1.78e4
22.65
  • 22.65
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.80e4
  • 1.80e4
21.94
  • 21.94
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.82e4
  • 1.82e4
21.10
  • 21.10
AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
1.90e4
  • 1.90e4
17.56
  • 17.56
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Amniota13 species13 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000003818.

Paralogs (same species)

Cross-references

EnsemblENSBTAG00000003818 (PGC)
HGNCHGNC:8890 (PGC)
EMBLDAAA02055061
Uniprot/SPTREMBLF1MWS3, F1MWS3_BOVIN

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