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B. taurus Gene: PDE1B - ENSBTAG00000004337 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000004337
NamePDE1B
Descriptionphosphodiesterase 1B [Source:HGNC Symbol;Acc:HGNC:8775]
OrganismBos taurus (cattle)
Synonym(s)pde1b1, pdes1b
Orthologs(s)16 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
887
  • 887
96.16
  • 96.16
AEIR
  • AEIR
UBERON:0007625pigment epithelium of eye
  • UBERON:0000104life cycle
2.04e3
  • 2.04e3
91.18
  • 91.18
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
2.28e3
  • 2.28e3
  • 1.33e4
90.11
  • 90.11
  • 42.22
AEIR
  • AEIR
  • AEIR
UBERON:0016538temporal cortex
  • UBERON:0000104life cycle
2.87e3
  • 2.87e3
87.56
  • 87.56
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
2.90e3
  • 2.90e3
87.45
  • 87.45
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.05e3
  • 3.05e3
  • 9.67e3
86.79
  • 86.79
  • 58.08
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000068embryo stage
3.58e3
  • 3.58e3
84.48
  • 84.48
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0000104life cycle
3.76e3
  • 3.76e3
83.72
  • 83.72
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
3.87e3
  • 3.87e3
83.23
  • 83.23
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
4.16e3
  • 4.16e3
81.96
  • 81.96
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0018241prime adult stage
4.30e3
  • 4.30e3
81.35
  • 81.35
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0000104life cycle
5.04e3
  • 5.04e3
78.15
  • 78.15
AEIR
  • AEIR
UBERON:0000056ureter
  • UBERON:0000104life cycle
6.07e3
  • 6.07e3
73.69
  • 73.69
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000068embryo stage
6.12e3
  • 6.12e3
  • 8.45e3
  • 9.73e3
  • 1.12e4
73.46
  • 73.46
  • 63.39
  • 57.85
  • 51.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
6.86e3
  • 6.86e3
70.29
  • 70.29
AEIR
  • AEIR
UBERON:0001374biceps femoris
  • UBERON:0000104life cycle
7.04e3
  • 7.04e3
69.49
  • 69.49
AEIR
  • AEIR
UBERON:0001739laryngeal cartilage
  • UBERON:0000104life cycle
7.48e3
  • 7.48e3
67.60
  • 67.60
AEIR
  • AEIR
UBERON:0000057urethra
  • UBERON:0000104life cycle
8.01e3
  • 8.01e3
65.31
  • 65.31
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.14e3
  • 8.14e3
  • 1.16e4
64.73
  • 64.73
  • 49.86
AEIR
  • AEIR
  • AEIR
UBERON:0002198neurohypophysis
  • UBERON:0000104life cycle
8.18e3
  • 8.18e3
64.53
  • 64.53
AEIR
  • AEIR
UBERON:0012648ampulla of uterine tube
  • UBERON:0000104life cycle
8.26e3
  • 8.26e3
64.21
  • 64.21
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.27e3
  • 8.27e3
  • 1.13e4
64.17
  • 64.17
  • 50.92
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
8.35e3
  • 8.35e3
63.79
  • 63.79
AEIR
  • AEIR
UBERON:0001000vas deferens
  • UBERON:0018241prime adult stage
8.41e3
  • 8.41e3
63.53
  • 63.53
AEIR
  • AEIR
UBERON:0001375semitendinosus
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
8.61e3
  • 8.61e3
  • 9.66e3
  • 9.73e3
62.68
  • 62.68
  • 58.15
  • 57.82
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
8.78e3
  • 8.78e3
61.97
  • 61.97
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.87e3
  • 8.87e3
  • 9.95e3
61.57
  • 61.57
  • 56.89
AEIR
  • AEIR
  • AEIR
UBERON:0004180mammary gland fat
  • UBERON:0018241prime adult stage
8.93e3
  • 8.93e3
61.31
  • 61.31
AEIR
  • AEIR
UBERON:0016632isthmus of fallopian tube
  • UBERON:0000104life cycle
8.97e3
  • 8.97e3
61.12
  • 61.12
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.14e3
  • 9.14e3
  • 1.17e4
60.38
  • 60.38
  • 49.18
AEIR
  • AEIR
  • AEIR
UBERON:0001381semimembranosus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
9.22e3
  • 9.22e3
  • 1.08e4
60.05
  • 60.05
  • 53.02
AEIR
  • AEIR
  • AEIR
UBERON:0000051fornix of vagina
  • UBERON:0000104life cycle
9.26e3
  • 9.26e3
59.88
  • 59.88
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
9.38e3
  • 9.38e3
  • 9.38e3
59.36
  • 59.36
  • 59.34
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
9.46e3
  • 9.46e3
  • 9.49e3
  • 1.37e4
  • 1.37e4
59.00
  • 59.00
  • 58.85
  • 40.61
  • 40.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002110gall bladder
  • UBERON:0000104life cycle
9.47e3
  • 9.47e3
58.94
  • 58.94
AEIR
  • AEIR
UBERON:0003984uterine tube infundibulum
  • UBERON:0000104life cycle
9.52e3
  • 9.52e3
58.76
  • 58.76
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000104life cycle
9.52e3
  • 9.52e3
58.72
  • 58.72
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.55e3
  • 9.55e3
  • 9.83e3
58.61
  • 58.61
  • 57.39
AEIR
  • AEIR
  • AEIR
UBERON:0001826nasal cavity mucosa
  • UBERON:0000104life cycle
9.66e3
  • 9.66e3
58.12
  • 58.12
AEIR
  • AEIR
UBERON:0001477infraspinatus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
9.72e3
  • 9.72e3
  • 9.73e3
57.88
  • 57.88
  • 57.85
AEIR
  • AEIR
  • AEIR
UBERON:0000378tongue muscle
  • UBERON:0000104life cycle
9.78e3
  • 9.78e3
57.60
  • 57.60
AEIR
  • AEIR
UBERON:0001378rectus femoris
  • UBERON:0000104life cycle
9.88e3
  • 9.88e3
57.17
  • 57.17
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.00e4
  • 1.00e4
56.51
  • 56.51
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000104life cycle
1.00e4
  • 1.00e4
56.47
  • 56.47
AEIR
  • AEIR
UBERON:0002383supraspinatus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.00e4
  • 1.00e4
  • 1.01e4
56.46
  • 56.46
  • 56.37
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
56.44
  • 56.44
AEIR
  • AEIR
UBERON:0001886choroid plexus
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
56.17
  • 56.17
AEIR
  • AEIR
UBERON:0001103diaphragm
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
56.16
  • 56.16
AEIR
  • AEIR
UBERON:0002512corpus luteum
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
56.00
  • 56.00
AEIR
  • AEIR
UBERON:0004716conceptus
  • UBERON:0000068embryo stage
1.02e4
  • 1.02e4
55.66
  • 55.66
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
  • 1.03e4
55.42
  • 55.42
  • 55.42
AEIR
  • AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
1.04e4
  • 1.04e4
54.72
  • 54.72
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
54.41
  • 54.41
AEIR
  • AEIR
UBERON:0001111intercostal muscle
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
54.37
  • 54.37
AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
54.29
  • 54.29
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
54.11
  • 54.11
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.07e4
  • 1.07e4
  • 1.07e4
  • 1.22e4
53.67
  • 53.67
  • 53.54
  • 47.26
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
53.60
  • 53.60
AEIR
  • AEIR
UBERON:0003126trachea
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
52.51
  • 52.51
AEIR
  • AEIR
UBERON:0001158descending colon
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
51.90
  • 51.90
AEIR
  • AEIR
UBERON:0001296myometrium
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
50.15
  • 50.15
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
  • 1.28e4
49.97
  • 49.97
  • 44.31
AEIR
  • AEIR
  • AEIR
UBERON:0007361ruminant reticulum
  • UBERON:0018241prime adult stage
1.16e4
  • 1.16e4
49.70
  • 49.70
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
49.18
  • 49.18
AEIR
  • AEIR
UBERON:0007362omasum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
  • 1.18e4
48.94
  • 48.94
  • 48.90
AEIR
  • AEIR
  • AEIR
UBERON:0002081cardiac atrium
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
  • 1.18e4
48.77
  • 48.77
  • 48.68
AEIR
  • AEIR
  • AEIR
UBERON:0010153rumen papilla
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
  • 1.20e4
48.11
  • 48.11
  • 48.07
AEIR
  • AEIR
  • AEIR
UBERON:0001156ascending colon
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
  • 1.21e4
47.56
  • 47.56
  • 47.53
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
47.34
  • 47.34
AEIR
  • AEIR
UBERON:0007367surface of tongue
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
46.55
  • 46.55
AEIR
  • AEIR
CL:0000503theca cell
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
46.01
  • 46.01
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
  • 1.49e4
45.93
  • 45.93
  • 35.56
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.25e4
  • 1.25e4
  • 1.28e4
45.92
  • 45.92
  • 44.65
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
44.85
  • 44.85
AEIR
  • AEIR
UBERON:0002247uterine horn
  • UBERON:0018241prime adult stage
1.28e4
  • 1.28e4
44.60
  • 44.60
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
  • 1.37e4
44.17
  • 44.17
  • 40.81
AEIR
  • AEIR
  • AEIR
UBERON:0002367prostate gland
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
43.93
  • 43.93
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
43.63
  • 43.63
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
43.35
  • 43.35
AEIR
  • AEIR
UBERON:0015869retropharyngeal lymph node
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
43.23
  • 43.23
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
1.32e4
  • 1.32e4
42.79
  • 42.79
AEIR
  • AEIR
UBERON:0007358abomasum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
  • 1.34e4
42.16
  • 42.16
  • 42.14
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
42.10
  • 42.10
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
41.89
  • 41.89
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
41.77
  • 41.77
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
41.38
  • 41.38
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
39.80
  • 39.80
AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
39.47
  • 39.47
AEIR
  • AEIR
UBERON:0007365rumen
  • UBERON:0000112sexually immature stage
1.41e4
  • 1.41e4
38.95
  • 38.95
AEIR
  • AEIR
UBERON:0002196adenohypophysis
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
36.86
  • 36.86
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
  • 1.64e4
  • 1.68e4
35.97
  • 35.97
  • 29.00
  • 27.14
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000004337.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSBTAG00000004337.

Cross-references

EnsemblENSBTAG00000004337 (PDE1B)
HGNCHGNC:8775 (PDE1B)
EMBLBC119963, DAAA02012826, M94867
Uniprot/SPTREMBLQ0VCW5, Q0VCW5_BOVIN
Uniprot/SWISSPROTPDE1B_BOVIN, Q01061

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