We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

B. taurus Gene: C1GALT1 - ENSBTAG00000004995 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000004995
NameC1GALT1
Descriptioncore 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24337]
OrganismBos taurus (cattle)
Synonym(s)c1galt, t-synthase
Orthologs(s)26 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0007358abomasum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
898
  • 898
  • 920
96.11
  • 96.11
  • 96.02
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.01e3
  • 1.01e3
95.63
  • 95.63
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.15e3
  • 1.15e3
95.02
  • 95.02
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.96e3
  • 1.96e3
  • 3.79e3
  • 4.42e3
  • 1.37e4
91.49
  • 91.49
  • 83.59
  • 80.83
  • 40.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004716conceptus
  • UBERON:0000068embryo stage
1.97e3
  • 1.97e3
91.48
  • 91.48
AEIR
  • AEIR
UBERON:0001156ascending colon
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.98e3
  • 1.98e3
  • 2.00e3
91.41
  • 91.41
  • 91.33
AEIR
  • AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
2.23e3
  • 2.23e3
90.36
  • 90.36
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.42e3
  • 2.42e3
  • 6.18e3
89.51
  • 89.51
  • 73.21
AEIR
  • AEIR
  • AEIR
UBERON:0008285rumen epithelium
  • UBERON:0018241prime adult stage
2.69e3
  • 2.69e3
88.32
  • 88.32
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
3.15e3
  • 3.15e3
86.36
  • 86.36
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000104life cycle
3.30e3
  • 3.30e3
85.69
  • 85.69
AEIR
  • AEIR
UBERON:0007365rumen
  • UBERON:0000112sexually immature stage
3.32e3
  • 3.32e3
85.63
  • 85.63
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.38e3
  • 3.38e3
  • 3.88e3
  • 4.14e3
85.37
  • 85.37
  • 83.18
  • 82.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002507abdominal lymph node
  • UBERON:0018241prime adult stage
3.54e3
  • 3.54e3
84.66
  • 84.66
AEIR
  • AEIR
UBERON:0001158descending colon
  • UBERON:0000104life cycle
3.75e3
  • 3.75e3
83.75
  • 83.75
AEIR
  • AEIR
CL:0000775neutrophil
  • UBERON:0018241prime adult stage
4.06e3
  • 4.06e3
82.39
  • 82.39
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.09e3
  • 4.09e3
  • 5.22e3
82.30
  • 82.30
  • 77.37
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
4.22e3
  • 4.22e3
  • 5.56e3
81.73
  • 81.73
  • 75.89
AEIR
  • AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
4.36e3
  • 4.36e3
81.10
  • 81.10
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
4.37e3
  • 4.37e3
81.05
  • 81.05
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
4.43e3
  • 4.43e3
80.81
  • 80.81
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
4.71e3
  • 4.71e3
79.59
  • 79.59
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
5.03e3
  • 5.03e3
78.18
  • 78.18
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.03e3
  • 5.03e3
  • 9.05e3
78.18
  • 78.18
  • 60.78
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.05e3
  • 5.05e3
  • 9.24e3
78.09
  • 78.09
  • 59.95
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000104life cycle
5.08e3
  • 5.08e3
77.99
  • 77.99
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0018241prime adult stage
5.28e3
  • 5.28e3
77.13
  • 77.13
AEIR
  • AEIR
UBERON:0001103diaphragm
  • UBERON:0000104life cycle
5.35e3
  • 5.35e3
76.84
  • 76.84
AEIR
  • AEIR
UBERON:0002367prostate gland
  • UBERON:0018241prime adult stage
5.64e3
  • 5.64e3
75.57
  • 75.57
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000104life cycle
5.66e3
  • 5.66e3
75.46
  • 75.46
AEIR
  • AEIR
UBERON:0001111intercostal muscle
  • UBERON:0000104life cycle
5.69e3
  • 5.69e3
75.33
  • 75.33
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
5.80e3
  • 5.80e3
  • 7.34e3
  • 9.02e3
74.87
  • 74.87
  • 68.17
  • 60.89
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.81e3
  • 5.81e3
  • 8.65e3
  • 1.21e4
74.82
  • 74.82
  • 62.51
  • 47.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0034908scapular muscle
  • UBERON:0000104life cycle
5.82e3
  • 5.82e3
74.76
  • 74.76
AEIR
  • AEIR
UBERON:0007362omasum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.94e3
  • 5.94e3
  • 5.98e3
74.26
  • 74.26
  • 74.07
AEIR
  • AEIR
  • AEIR
UBERON:0001375semitendinosus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.02e3
  • 6.02e3
  • 7.78e3
  • 8.24e3
73.91
  • 73.91
  • 66.29
  • 64.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0000104life cycle
6.15e3
  • 6.15e3
73.34
  • 73.34
AEIR
  • AEIR
UBERON:0002000gluteal muscle
  • UBERON:0000104life cycle
6.21e3
  • 6.21e3
73.11
  • 73.11
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0018241prime adult stage
6.23e3
  • 6.23e3
73.02
  • 73.02
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.26e3
  • 6.26e3
  • 6.99e3
72.85
  • 72.85
  • 69.69
AEIR
  • AEIR
  • AEIR
UBERON:0015869retropharyngeal lymph node
  • UBERON:0000104life cycle
6.30e3
  • 6.30e3
72.72
  • 72.72
AEIR
  • AEIR
UBERON:0002196adenohypophysis
  • UBERON:0000104life cycle
6.31e3
  • 6.31e3
72.66
  • 72.66
AEIR
  • AEIR
UBERON:0000051fornix of vagina
  • UBERON:0000104life cycle
6.39e3
  • 6.39e3
72.30
  • 72.30
AEIR
  • AEIR
UBERON:0007367surface of tongue
  • UBERON:0000104life cycle
6.44e3
  • 6.44e3
72.08
  • 72.08
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.45e3
  • 6.45e3
  • 6.47e3
72.06
  • 72.06
  • 71.98
AEIR
  • AEIR
  • AEIR
CL:0000711cumulus cell
  • UBERON:0000104life cycle
6.58e3
  • 6.58e3
71.49
  • 71.49
AEIR
  • AEIR
UBERON:0010153rumen papilla
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.62e3
  • 6.62e3
  • 6.73e3
71.30
  • 71.30
  • 70.86
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
6.64e3
  • 6.64e3
71.22
  • 71.22
AEIR
  • AEIR
UBERON:0000057urethra
  • UBERON:0000104life cycle
6.71e3
  • 6.71e3
70.92
  • 70.92
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.84e3
  • 6.84e3
  • 7.38e3
70.34
  • 70.34
  • 68.02
AEIR
  • AEIR
  • AEIR
UBERON:0001378rectus femoris
  • UBERON:0000104life cycle
6.87e3
  • 6.87e3
70.23
  • 70.23
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0018241prime adult stage
6.97e3
  • 6.97e3
69.78
  • 69.78
AEIR
  • AEIR
UBERON:0002110gall bladder
  • UBERON:0000104life cycle
7.13e3
  • 7.13e3
69.09
  • 69.09
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000104life cycle
7.24e3
  • 7.24e3
68.62
  • 68.62
AEIR
  • AEIR
UBERON:0000378tongue muscle
  • UBERON:0000104life cycle
7.27e3
  • 7.27e3
68.51
  • 68.51
AEIR
  • AEIR
UBERON:0001381semimembranosus muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.28e3
  • 7.28e3
  • 1.02e4
68.47
  • 68.47
  • 55.96
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.40e3
  • 7.40e3
  • 1.01e4
67.93
  • 67.93
  • 56.23
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.40e3
  • 7.40e3
  • 1.09e4
67.92
  • 67.92
  • 52.71
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
7.48e3
  • 7.48e3
67.60
  • 67.60
AEIR
  • AEIR
UBERON:0004180mammary gland fat
  • UBERON:0018241prime adult stage
7.51e3
  • 7.51e3
67.45
  • 67.45
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0018241prime adult stage
7.76e3
  • 7.76e3
66.38
  • 66.38
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.93e3
  • 7.93e3
  • 7.97e3
65.63
  • 65.63
  • 65.46
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.05e3
  • 8.05e3
  • 9.65e3
65.12
  • 65.12
  • 58.18
AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000068embryo stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.07e3
  • 8.07e3
  • 8.53e3
  • 9.37e3
  • 1.04e4
65.01
  • 65.01
  • 63.05
  • 59.38
  • 54.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002383supraspinatus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.11e3
  • 8.11e3
  • 8.12e3
64.85
  • 64.85
  • 64.81
AEIR
  • AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • UBERON:0018241prime adult stage
8.22e3
  • 8.22e3
64.39
  • 64.39
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000068embryo stage
8.25e3
  • 8.25e3
64.26
  • 64.26
AEIR
  • AEIR
UBERON:0007361ruminant reticulum
  • UBERON:0018241prime adult stage
8.27e3
  • 8.27e3
64.14
  • 64.14
AEIR
  • AEIR
UBERON:0001477infraspinatus muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.33e3
  • 8.33e3
  • 8.38e3
63.89
  • 63.89
  • 63.68
AEIR
  • AEIR
  • AEIR
UBERON:0000056ureter
  • UBERON:0000104life cycle
8.44e3
  • 8.44e3
63.43
  • 63.43
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
8.47e3
  • 8.47e3
63.30
  • 63.30
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.50e3
  • 8.50e3
  • 9.91e3
63.18
  • 63.18
  • 57.06
AEIR
  • AEIR
  • AEIR
UBERON:0002512corpus luteum
  • UBERON:0000104life cycle
8.64e3
  • 8.64e3
62.55
  • 62.55
AEIR
  • AEIR
UBERON:0001296myometrium
  • UBERON:0000104life cycle
8.65e3
  • 8.65e3
62.52
  • 62.52
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0000104life cycle
8.70e3
  • 8.70e3
62.31
  • 62.31
AEIR
  • AEIR
UBERON:0002081cardiac atrium
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.79e3
  • 8.79e3
  • 8.87e3
61.93
  • 61.93
  • 61.55
AEIR
  • AEIR
  • AEIR
UBERON:0001374biceps femoris
  • UBERON:0000104life cycle
8.85e3
  • 8.85e3
61.63
  • 61.63
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.86e3
  • 8.86e3
  • 8.88e3
61.62
  • 61.62
  • 61.54
AEIR
  • AEIR
  • AEIR
UBERON:0001000vas deferens
  • UBERON:0018241prime adult stage
8.86e3
  • 8.86e3
61.61
  • 61.61
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0000104life cycle
9.00e3
  • 9.00e3
60.99
  • 60.99
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
9.05e3
  • 9.05e3
60.77
  • 60.77
AEIR
  • AEIR
UBERON:0002198neurohypophysis
  • UBERON:0000104life cycle
9.39e3
  • 9.39e3
59.32
  • 59.32
AEIR
  • AEIR
UBERON:0003984uterine tube infundibulum
  • UBERON:0000104life cycle
9.52e3
  • 9.52e3
58.73
  • 58.73
AEIR
  • AEIR
UBERON:0016538temporal cortex
  • UBERON:0000104life cycle
9.55e3
  • 9.55e3
58.61
  • 58.61
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0000104life cycle
9.70e3
  • 9.70e3
57.96
  • 57.96
AEIR
  • AEIR
UBERON:0003126trachea
  • UBERON:0000104life cycle
9.75e3
  • 9.75e3
57.76
  • 57.76
AEIR
  • AEIR
UBERON:0001886choroid plexus
  • UBERON:0018241prime adult stage
9.76e3
  • 9.76e3
57.71
  • 57.71
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
9.89e3
  • 9.89e3
57.14
  • 57.14
AEIR
  • AEIR
UBERON:0016632isthmus of fallopian tube
  • UBERON:0000104life cycle
1.04e4
  • 1.04e4
55.10
  • 55.10
AEIR
  • AEIR
UBERON:0012648ampulla of uterine tube
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
54.60
  • 54.60
AEIR
  • AEIR
CL:0000503theca cell
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
54.55
  • 54.55
AEIR
  • AEIR
UBERON:0004358caput epididymis
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
54.05
  • 54.05
AEIR
  • AEIR
UBERON:0002247uterine horn
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
54.03
  • 54.03
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0000104life cycle
1.07e4
  • 1.07e4
53.65
  • 53.65
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
52.46
  • 52.46
AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
51.81
  • 51.81
AEIR
  • AEIR
UBERON:0007625pigment epithelium of eye
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
51.18
  • 51.18
AEIR
  • AEIR
UBERON:0001739laryngeal cartilage
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
43.43
  • 43.43
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Bilateria22 species26 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000004995.

Cross-references

EnsemblENSBTAG00000004995 (C1GALT1)
HGNCHGNC:24337 (C1GALT1)
EMBLBC120299
Uniprot/SWISSPROTC1GLT_BOVIN, Q0VC84

Do not show this banner again