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B. taurus Gene: BARHL2 - ENSBTAG00000005938 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000005938
NameBARHL2
DescriptionBarH-like homeobox 2 [Source:HGNC Symbol;Acc:HGNC:954]
OrganismBos taurus (cattle)
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.82e3
  • 3.82e3
  • 2.01e4
83.44
  • 83.44
  • 13.10
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
7.74e3
  • 7.74e3
66.45
  • 66.45
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
53.37
  • 53.37
AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
48.92
  • 48.92
AEIR
  • AEIR
UBERON:0002196adenohypophysis
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
44.01
  • 44.01
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
  • 1.44e4
  • 1.54e4
41.51
  • 41.51
  • 37.67
  • 33.16
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
  • 1.44e4
  • 1.47e4
40.61
  • 40.61
  • 37.78
  • 36.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
37.69
  • 37.69
AEIR
  • AEIR
UBERON:0002198neurohypophysis
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
37.25
  • 37.25
AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
35.64
  • 35.64
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.49e4
  • 1.49e4
35.51
  • 35.51
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.59e4
  • 1.59e4
30.91
  • 30.91
AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
1.90e4
  • 1.90e4
17.86
  • 17.86
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000005938.

Cross-references

EnsemblENSBTAG00000005938 (BARHL2)
HGNCHGNC:954 (BARHL2)
EMBLDAAA02007925
Uniprot/SPTREMBLF1N4U7, F1N4U7_BOVIN

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