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B. taurus Gene: SYNPO2 - ENSBTAG00000006434 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000006434
NameSYNPO2
Descriptionsynaptopodin 2 [Source:HGNC Symbol;Acc:HGNC:17732]
OrganismBos taurus (cattle)
Synonym(s)myopodin
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
320
  • 320
  • 1.12e4
98.62
  • 98.62
  • 51.27
AEIR
  • AEIR
  • AEIR
UBERON:0001886choroid plexus
  • UBERON:0018241prime adult stage
325
  • 325
98.60
  • 98.60
AEIR
  • AEIR
UBERON:0002383supraspinatus muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
336
  • 336
  • 337
98.55
  • 98.55
  • 98.54
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
354
  • 354
  • 355
98.47
  • 98.47
  • 98.47
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000104life cycle
356
  • 356
98.46
  • 98.46
AEIR
  • AEIR
UBERON:0001375semitendinosus
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
399
  • 399
  • 473
  • 5.53e3
98.27
  • 98.27
  • 97.95
  • 76.05
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001381semimembranosus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
412
  • 412
  • 629
98.22
  • 98.22
  • 97.28
AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
421
  • 421
  • 784
98.18
  • 98.18
  • 96.61
AEIR
  • AEIR
  • AEIR
UBERON:0001378rectus femoris
  • UBERON:0000104life cycle
431
  • 431
98.14
  • 98.14
AEIR
  • AEIR
UBERON:0001477infraspinatus muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
453
  • 453
  • 455
98.04
  • 98.04
  • 98.03
AEIR
  • AEIR
  • AEIR
UBERON:0001374biceps femoris
  • UBERON:0000104life cycle
472
  • 472
97.96
  • 97.96
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
477
  • 477
  • 1.18e4
97.94
  • 97.94
  • 48.86
AEIR
  • AEIR
  • AEIR
UBERON:0002512corpus luteum
  • UBERON:0000104life cycle
573
  • 573
97.52
  • 97.52
AEIR
  • AEIR
UBERON:0007365rumen
  • UBERON:0000112sexually immature stage
1.01e3
  • 1.01e3
95.61
  • 95.61
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.02e3
  • 1.02e3
95.56
  • 95.56
AEIR
  • AEIR
UBERON:0001296myometrium
  • UBERON:0000104life cycle
1.13e3
  • 1.13e3
95.10
  • 95.10
AEIR
  • AEIR
UBERON:0002081cardiac atrium
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.60e3
  • 1.60e3
  • 1.61e3
93.06
  • 93.06
  • 93.02
AEIR
  • AEIR
  • AEIR
UBERON:0001156ascending colon
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.93e3
  • 1.93e3
  • 1.94e3
91.66
  • 91.66
  • 91.59
AEIR
  • AEIR
  • AEIR
UBERON:0001000vas deferens
  • UBERON:0018241prime adult stage
2.48e3
  • 2.48e3
89.26
  • 89.26
AEIR
  • AEIR
UBERON:0007362omasum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.59e3
  • 2.59e3
  • 2.59e3
88.78
  • 88.78
  • 88.78
AEIR
  • AEIR
  • AEIR
UBERON:0003126trachea
  • UBERON:0000104life cycle
2.65e3
  • 2.65e3
88.54
  • 88.54
AEIR
  • AEIR
UBERON:0001158descending colon
  • UBERON:0000104life cycle
2.67e3
  • 2.67e3
88.41
  • 88.41
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
3.13e3
  • 3.13e3
86.42
  • 86.42
AEIR
  • AEIR
UBERON:0000378tongue muscle
  • UBERON:0000104life cycle
3.22e3
  • 3.22e3
86.03
  • 86.03
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0018241prime adult stage
3.29e3
  • 3.29e3
85.76
  • 85.76
AEIR
  • AEIR
CL:0000503theca cell
  • UBERON:0018241prime adult stage
3.44e3
  • 3.44e3
85.11
  • 85.11
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.09e3
  • 4.09e3
  • 5.21e3
82.28
  • 82.28
  • 77.42
AEIR
  • AEIR
  • AEIR
UBERON:0007367surface of tongue
  • UBERON:0000104life cycle
4.12e3
  • 4.12e3
82.15
  • 82.15
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0000104life cycle
4.65e3
  • 4.65e3
79.84
  • 79.84
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.73e3
  • 4.73e3
  • 8.14e3
79.51
  • 79.51
  • 64.72
AEIR
  • AEIR
  • AEIR
UBERON:0001111intercostal muscle
  • UBERON:0000104life cycle
4.84e3
  • 4.84e3
79.03
  • 79.03
AEIR
  • AEIR
UBERON:0000057urethra
  • UBERON:0000104life cycle
5.40e3
  • 5.40e3
76.60
  • 76.60
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0000104life cycle
5.55e3
  • 5.55e3
75.94
  • 75.94
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
5.59e3
  • 5.59e3
75.76
  • 75.76
AEIR
  • AEIR
UBERON:0002110gall bladder
  • UBERON:0000104life cycle
5.59e3
  • 5.59e3
75.76
  • 75.76
AEIR
  • AEIR
UBERON:0007625pigment epithelium of eye
  • UBERON:0000104life cycle
5.78e3
  • 5.78e3
74.96
  • 74.96
AEIR
  • AEIR
UBERON:0002247uterine horn
  • UBERON:0018241prime adult stage
5.80e3
  • 5.80e3
74.85
  • 74.85
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.82e3
  • 5.82e3
  • 8.93e3
74.76
  • 74.76
  • 61.29
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000104life cycle
5.83e3
  • 5.83e3
74.73
  • 74.73
AEIR
  • AEIR
UBERON:0007361ruminant reticulum
  • UBERON:0018241prime adult stage
5.87e3
  • 5.87e3
74.56
  • 74.56
AEIR
  • AEIR
UBERON:0001739laryngeal cartilage
  • UBERON:0000104life cycle
5.88e3
  • 5.88e3
74.50
  • 74.50
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.19e3
  • 6.19e3
  • 8.82e3
73.16
  • 73.16
  • 61.77
AEIR
  • AEIR
  • AEIR
UBERON:0012648ampulla of uterine tube
  • UBERON:0000104life cycle
6.44e3
  • 6.44e3
72.10
  • 72.10
AEIR
  • AEIR
UBERON:0016632isthmus of fallopian tube
  • UBERON:0000104life cycle
6.65e3
  • 6.65e3
71.18
  • 71.18
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000104life cycle
6.67e3
  • 6.67e3
71.08
  • 71.08
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000104life cycle
6.77e3
  • 6.77e3
70.65
  • 70.65
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.83e3
  • 6.83e3
  • 8.77e3
70.40
  • 70.40
  • 61.98
AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
6.89e3
  • 6.89e3
70.12
  • 70.12
AEIR
  • AEIR
UBERON:0004180mammary gland fat
  • UBERON:0018241prime adult stage
7.04e3
  • 7.04e3
69.49
  • 69.49
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0000104life cycle
7.17e3
  • 7.17e3
68.94
  • 68.94
AEIR
  • AEIR
UBERON:0000056ureter
  • UBERON:0000104life cycle
7.18e3
  • 7.18e3
68.89
  • 68.89
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
7.20e3
  • 7.20e3
68.79
  • 68.79
AEIR
  • AEIR
UBERON:0003984uterine tube infundibulum
  • UBERON:0000104life cycle
7.49e3
  • 7.49e3
67.56
  • 67.56
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.57e3
  • 7.57e3
  • 1.27e4
  • 1.37e4
  • 1.58e4
67.19
  • 67.19
  • 44.81
  • 40.61
  • 31.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
7.92e3
  • 7.92e3
65.67
  • 65.67
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.98e3
  • 7.98e3
  • 1.10e4
65.43
  • 65.43
  • 52.41
AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
8.05e3
  • 8.05e3
  • 8.50e3
  • 9.67e3
  • 1.08e4
65.11
  • 65.11
  • 63.14
  • 58.10
  • 53.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
8.12e3
  • 8.12e3
64.79
  • 64.79
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0018241prime adult stage
8.13e3
  • 8.13e3
64.76
  • 64.76
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
8.18e3
  • 8.18e3
64.55
  • 64.55
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
8.22e3
  • 8.22e3
64.38
  • 64.38
AEIR
  • AEIR
UBERON:0007358abomasum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.39e3
  • 8.39e3
  • 8.39e3
63.65
  • 63.65
  • 63.65
AEIR
  • AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0018241prime adult stage
8.88e3
  • 8.88e3
61.53
  • 61.53
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
9.26e3
  • 9.26e3
59.86
  • 59.86
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
9.64e3
  • 9.64e3
  • 1.03e4
58.21
  • 58.21
  • 55.26
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
9.72e3
  • 9.72e3
  • 1.06e4
  • 1.14e4
57.88
  • 57.88
  • 54.07
  • 50.71
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
9.73e3
  • 9.73e3
57.84
  • 57.84
AEIR
  • AEIR
UBERON:0002367prostate gland
  • UBERON:0018241prime adult stage
9.90e3
  • 9.90e3
57.08
  • 57.08
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
  • 1.27e4
56.34
  • 56.34
  • 44.86
AEIR
  • AEIR
  • AEIR
UBERON:0004716conceptus
  • UBERON:0000068embryo stage
1.02e4
  • 1.02e4
55.85
  • 55.85
AEIR
  • AEIR
UBERON:0016538temporal cortex
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
55.73
  • 55.73
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
54.50
  • 54.50
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
  • 1.06e4
54.38
  • 54.38
  • 53.99
AEIR
  • AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
54.37
  • 54.37
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
54.14
  • 54.14
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
54.14
  • 54.14
AEIR
  • AEIR
UBERON:0008285rumen epithelium
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
53.98
  • 53.98
AEIR
  • AEIR
UBERON:0001103diaphragm
  • UBERON:0000104life cycle
1.07e4
  • 1.07e4
53.83
  • 53.83
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
53.61
  • 53.61
AEIR
  • AEIR
UBERON:0000051fornix of vagina
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
52.44
  • 52.44
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
50.63
  • 50.63
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
  • 1.28e4
49.51
  • 49.51
  • 44.54
AEIR
  • AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
  • 1.22e4
48.43
  • 48.43
  • 46.99
AEIR
  • AEIR
  • AEIR
UBERON:0010153rumen papilla
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
  • 1.22e4
47.08
  • 47.08
  • 47.08
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000068embryo stage
1.25e4
  • 1.25e4
45.62
  • 45.62
AEIR
  • AEIR
UBERON:0001826nasal cavity mucosa
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
45.54
  • 45.54
AEIR
  • AEIR
UBERON:0004358caput epididymis
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
45.39
  • 45.39
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
45.04
  • 45.04
AEIR
  • AEIR
UBERON:0015869retropharyngeal lymph node
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
44.80
  • 44.80
AEIR
  • AEIR
UBERON:0002198neurohypophysis
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
41.91
  • 41.91
AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
41.41
  • 41.41
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
41.08
  • 41.08
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
40.59
  • 40.59
AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
40.30
  • 40.30
AEIR
  • AEIR
UBERON:0002196adenohypophysis
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
40.26
  • 40.26
AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
1.42e4
  • 1.42e4
38.55
  • 38.55
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000006434.

Cross-references

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