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B. taurus Gene: SEC22C - ENSBTAG00000006570 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000006570
NameSEC22C
DescriptionSEC22 homolog C, vesicle trafficking protein [Source:HGNC Symbol;Acc:HGNC:16828]
OrganismBos taurus (cattle)
Synonym(s)mgc13261, mgc5373, sec22l3
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001477infraspinatus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.48e3
  • 5.48e3
  • 5.51e3
76.27
  • 76.27
  • 76.11
AEIR
  • AEIR
  • AEIR
UBERON:0001375semitendinosus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.62e3
  • 5.62e3
  • 5.64e3
  • 8.92e3
75.63
  • 75.63
  • 75.55
  • 61.32
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
5.63e3
  • 5.63e3
75.58
  • 75.58
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.84e3
  • 5.84e3
  • 8.53e3
74.71
  • 74.71
  • 63.03
AEIR
  • AEIR
  • AEIR
UBERON:0001381semimembranosus muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.21e3
  • 6.21e3
  • 6.37e3
73.08
  • 73.08
  • 72.40
AEIR
  • AEIR
  • AEIR
UBERON:0001739laryngeal cartilage
  • UBERON:0000104life cycle
6.53e3
  • 6.53e3
71.71
  • 71.71
AEIR
  • AEIR
CL:0000775neutrophil
  • UBERON:0018241prime adult stage
6.69e3
  • 6.69e3
70.99
  • 70.99
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
6.74e3
  • 6.74e3
70.81
  • 70.81
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.74e3
  • 6.74e3
  • 6.75e3
70.80
  • 70.80
  • 70.75
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000104life cycle
6.77e3
  • 6.77e3
70.66
  • 70.66
AEIR
  • AEIR
UBERON:0000378tongue muscle
  • UBERON:0000104life cycle
6.99e3
  • 6.99e3
69.71
  • 69.71
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.13e3
  • 7.13e3
  • 8.83e3
  • 9.23e3
69.11
  • 69.11
  • 61.72
  • 60.02
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002383supraspinatus muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.21e3
  • 7.21e3
  • 7.22e3
68.74
  • 68.74
  • 68.72
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.24e3
  • 7.24e3
  • 1.15e4
68.64
  • 68.64
  • 49.99
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.56e3
  • 7.56e3
  • 1.07e4
67.22
  • 67.22
  • 53.64
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
7.61e3
  • 7.61e3
67.00
  • 67.00
AEIR
  • AEIR
UBERON:0001378rectus femoris
  • UBERON:0000104life cycle
7.74e3
  • 7.74e3
66.46
  • 66.46
AEIR
  • AEIR
UBERON:0001374biceps femoris
  • UBERON:0000104life cycle
7.75e3
  • 7.75e3
66.41
  • 66.41
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
7.90e3
  • 7.90e3
65.76
  • 65.76
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
7.93e3
  • 7.93e3
  • 8.99e3
  • 1.02e4
  • 1.03e4
65.65
  • 65.65
  • 61.06
  • 55.82
  • 55.46
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002512corpus luteum
  • UBERON:0000104life cycle
8.12e3
  • 8.12e3
64.82
  • 64.82
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0018241prime adult stage
8.16e3
  • 8.16e3
64.62
  • 64.62
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
8.22e3
  • 8.22e3
  • 8.50e3
  • 1.15e4
  • 1.37e4
64.36
  • 64.36
  • 63.18
  • 50.12
  • 40.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001886choroid plexus
  • UBERON:0018241prime adult stage
8.28e3
  • 8.28e3
64.10
  • 64.10
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0018241prime adult stage
8.41e3
  • 8.41e3
63.57
  • 63.57
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
8.50e3
  • 8.50e3
63.16
  • 63.16
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.70e3
  • 8.70e3
  • 8.93e3
  • 1.03e4
62.28
  • 62.28
  • 61.29
  • 55.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0000104life cycle
8.82e3
  • 8.82e3
61.76
  • 61.76
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.82e3
  • 8.82e3
  • 9.76e3
61.76
  • 61.76
  • 57.70
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
8.95e3
  • 8.95e3
61.22
  • 61.22
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
8.95e3
  • 8.95e3
61.22
  • 61.22
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000104life cycle
9.12e3
  • 9.12e3
60.48
  • 60.48
AEIR
  • AEIR
UBERON:0001826nasal cavity mucosa
  • UBERON:0000104life cycle
9.17e3
  • 9.17e3
60.25
  • 60.25
AEIR
  • AEIR
UBERON:0001111intercostal muscle
  • UBERON:0000104life cycle
9.34e3
  • 9.34e3
59.51
  • 59.51
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0018241prime adult stage
9.36e3
  • 9.36e3
59.45
  • 59.45
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
9.37e3
  • 9.37e3
59.37
  • 59.37
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0018241prime adult stage
9.49e3
  • 9.49e3
58.89
  • 58.89
AEIR
  • AEIR
UBERON:0004716conceptus
  • UBERON:0000068embryo stage
9.52e3
  • 9.52e3
58.72
  • 58.72
AEIR
  • AEIR
UBERON:0007367surface of tongue
  • UBERON:0000104life cycle
9.53e3
  • 9.53e3
58.71
  • 58.71
AEIR
  • AEIR
UBERON:0003984uterine tube infundibulum
  • UBERON:0000104life cycle
9.53e3
  • 9.53e3
58.71
  • 58.71
AEIR
  • AEIR
UBERON:0002081cardiac atrium
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
9.57e3
  • 9.57e3
  • 9.59e3
58.54
  • 58.54
  • 58.45
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
9.57e3
  • 9.57e3
  • 1.07e4
58.53
  • 58.53
  • 53.81
AEIR
  • AEIR
  • AEIR
UBERON:0007365rumen
  • UBERON:0000112sexually immature stage
9.64e3
  • 9.64e3
58.24
  • 58.24
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0000104life cycle
9.68e3
  • 9.68e3
58.05
  • 58.05
AEIR
  • AEIR
UBERON:0002367prostate gland
  • UBERON:0018241prime adult stage
9.74e3
  • 9.74e3
57.79
  • 57.79
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
9.76e3
  • 9.76e3
  • 1.21e4
  • 1.45e4
57.70
  • 57.70
  • 47.69
  • 37.29
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
9.87e3
  • 9.87e3
57.22
  • 57.22
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
9.93e3
  • 9.93e3
56.97
  • 56.97
AEIR
  • AEIR
UBERON:0008285rumen epithelium
  • UBERON:0018241prime adult stage
1.00e4
  • 1.00e4
56.56
  • 56.56
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
56.21
  • 56.21
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
  • 1.02e4
56.18
  • 56.18
  • 55.80
AEIR
  • AEIR
  • AEIR
UBERON:0000056ureter
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
56.04
  • 56.04
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
  • 1.09e4
55.80
  • 55.80
  • 52.86
AEIR
  • AEIR
  • AEIR
UBERON:0001103diaphragm
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
55.65
  • 55.65
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.02e4
  • 1.02e4
  • 1.09e4
55.64
  • 55.64
  • 52.88
AEIR
  • AEIR
  • AEIR
CL:0000503theca cell
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
55.55
  • 55.55
AEIR
  • AEIR
UBERON:0007358abomasum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
  • 1.03e4
55.27
  • 55.27
  • 55.24
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
  • 1.15e4
54.83
  • 54.83
  • 50.29
AEIR
  • AEIR
  • AEIR
UBERON:0004358caput epididymis
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
54.38
  • 54.38
AEIR
  • AEIR
UBERON:0001156ascending colon
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
  • 1.05e4
54.29
  • 54.29
  • 54.28
AEIR
  • AEIR
  • AEIR
UBERON:0016632isthmus of fallopian tube
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
54.09
  • 54.09
AEIR
  • AEIR
UBERON:0003126trachea
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
54.06
  • 54.06
AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
53.99
  • 53.99
AEIR
  • AEIR
UBERON:0007625pigment epithelium of eye
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
53.92
  • 53.92
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000068embryo stage
1.07e4
  • 1.07e4
53.62
  • 53.62
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0000104life cycle
1.07e4
  • 1.07e4
53.43
  • 53.43
AEIR
  • AEIR
UBERON:0015869retropharyngeal lymph node
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
53.32
  • 53.32
AEIR
  • AEIR
UBERON:0000057urethra
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
53.20
  • 53.20
AEIR
  • AEIR
UBERON:0007362omasum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
  • 1.09e4
53.12
  • 53.12
  • 52.74
AEIR
  • AEIR
  • AEIR
CL:0000711cumulus cell
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
53.11
  • 53.11
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
53.11
  • 53.11
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
  • 1.22e4
52.92
  • 52.92
  • 47.14
AEIR
  • AEIR
  • AEIR
UBERON:0001296myometrium
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
52.38
  • 52.38
AEIR
  • AEIR
UBERON:0012648ampulla of uterine tube
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
52.37
  • 52.37
AEIR
  • AEIR
UBERON:0002110gall bladder
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
51.17
  • 51.17
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.13e4
  • 1.13e4
51.09
  • 51.09
AEIR
  • AEIR
UBERON:0002196adenohypophysis
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
50.61
  • 50.61
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
50.60
  • 50.60
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
50.41
  • 50.41
AEIR
  • AEIR
UBERON:0016538temporal cortex
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
50.06
  • 50.06
AEIR
  • AEIR
UBERON:0004180mammary gland fat
  • UBERON:0018241prime adult stage
1.15e4
  • 1.15e4
50.02
  • 50.02
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
49.92
  • 49.92
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
49.87
  • 49.87
AEIR
  • AEIR
UBERON:0001158descending colon
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
49.30
  • 49.30
AEIR
  • AEIR
UBERON:0001000vas deferens
  • UBERON:0018241prime adult stage
1.17e4
  • 1.17e4
49.17
  • 49.17
AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
49.05
  • 49.05
AEIR
  • AEIR
UBERON:0002198neurohypophysis
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
48.93
  • 48.93
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
  • 1.23e4
48.77
  • 48.77
  • 46.77
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
  • 1.20e4
48.76
  • 48.76
  • 47.82
AEIR
  • AEIR
  • AEIR
UBERON:0007361ruminant reticulum
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
48.28
  • 48.28
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
  • 1.20e4
47.97
  • 47.97
  • 47.94
AEIR
  • AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
47.51
  • 47.51
AEIR
  • AEIR
UBERON:0002247uterine horn
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
47.32
  • 47.32
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
45.77
  • 45.77
AEIR
  • AEIR
UBERON:0000051fornix of vagina
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
43.05
  • 43.05
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
40.64
  • 40.64
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000006570.

Cross-references

EnsemblENSBTAG00000006570 (SEC22C)
HGNCHGNC:16828 (SEC22C)
EMBLBC110195
Uniprot/SWISSPROTQ2YDJ2, SC22C_BOVIN

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